Phaeodactylum tricornutum: PHATRDRAFT_24195
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Entry
PHATRDRAFT_24195 CDS
T01075
Name
(RefSeq) CPS III, carbamoyl-phosphate synthase mitochindrial precursor
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00220
Arginine biosynthesis
pti00250
Alanine, aspartate and glutamate metabolism
pti00910
Nitrogen metabolism
pti01100
Metabolic pathways
pti01200
Carbon metabolism
pti01230
Biosynthesis of amino acids
Module
pti_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PHATRDRAFT_24195
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PHATRDRAFT_24195
00220 Arginine biosynthesis
PHATRDRAFT_24195
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pti01002
]
PHATRDRAFT_24195
Enzymes [BR:
pti01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
PHATRDRAFT_24195
Peptidases and inhibitors [BR:
pti01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
PHATRDRAFT_24195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
CPSase_L_D3
Dala_Dala_lig_C
MGS
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
Peptidase_C26
GARS_A
Peptidase_M17_N
Motif
Other DBs
NCBI-GeneID:
7199350
NCBI-ProteinID:
XP_002185520
JGI:
24195
UniProt:
B7GEG8
LinkDB
All DBs
Position
31:complement(96119..101909)
Genome browser
AA seq
1463 aa
AA seq
DB search
MTGRSFGCHESVEGEVVFATGMVGYPESLTDPSYQGQILTVTTPMVGNYGVPDRKAVDEL
GLPAYFESSRIHATGLIVQDYSHHYSHWKAASSLGDWLKEEGIPGLSDIDTRMLTKKIRE
KGAMLARIEVDLDAPVPDFGKMVDPNARHLVNEVSTKEVKVYGKGNPTKVIAVDGGMKFN
IIRQLCKRGVELTVVPWDYPFASEMHKYDGLFLSNGPGDPVMCDVTIKELEKVISVPDSE
VKPIFGICLGNQLMGIAAGGIAKKLPFGNRGQNQPVLNHQTGECYITPQNHGFHIDCATL
KPGWKTLFTNANDGSNEGIAHETRPYFTAQFHPEASSGPTDTEFMFDTFLEACKKPMDKI
RFPVRKPAPPRSNAKKVLLLGSGGTSIGQAGEFDYSGGQAIKALKEEGLEVVLMNPNIAS
VQTNTDDKSASKADHVFFLPVTPEFVEEVIKKEKPDGVIISMGGQTALNCAVQMHESGTF
EKYGVKILGTQIPAVINTEDRQLFSDRLNEINEKIAESYTAQTIPEAVEHAKKVGYPLMI
RSAFALGGLGSGICVDEDHLKDMAKKALSVSPQILVEKSMKGWKEVEYEVVRDTHDNCVT
VCNMENFDPLGIHTGDSIVMAPSQTLSNEEYHMLRETAIKVVRHLGIVGECNIQYALHPE
SLEYAIIEVNARLSRSSALASKATGYPLAFVAAKLCLGIPLTEVVNSVTKKTQAAFEPSL
DYIVTKIPRWDMSKFEGVSTEIGSAMKSVGEVMGIGRTLEESLQKALRMVDPSVAGFQPK
NRFETMAALRKELEVPTDKRIFAIAQALHEKTMTVQEIHDITKIDHWFLRRLEDIVKVWD
ELETITLDQMSDDQMLTAKKMGYSDVQIAECLGGNSTEDDVRAKRIAGGILPFNKQIDTL
AAEYPAETNYLYMTYHGMENDVKPADGGVIVLGSGAYRIGSSIEFDWCGVSCIRTLRHLG
YKSTMINYNPETVSTDYDECDRLYFEELSKERVLDIYHRDKSDGVIVSVGGQIPNGLAIP
LDKAGVKILGTTAKMIDNAEDRNKFSDMIDEIGVQQPAWRELTTSQDALDFAAKVGYPVL
VRPSYVLSGAAMNVAYNDDQLRACLEEAATVSKEHPVVISDFIEGAVEIECDGVGKDGEL
IAAAIHEHIENAGVHSGDASLVLPPHTLSAYTKERVREAARKIVKRLDITGPVNIQFVAK
GTDVMCIECNVRASRSFPFVSKTMGVDFIEAATKAIVGEDTSNMNLPTLETRDRPNGFVG
VKVPMFSFARLRGSDPVLGVEMASTGEVACFGASKEEAFLKALLSTGFKMPEKKILVSVQ
EELIDEFTHSAYQLHELGYTLVATEATAKALAKNRVPCEVVAYPTDTSGARTAVDMIRDE
EIGMVINIPTHQSKRLNDNFQMRRSAVDFGTPLLTNLNLVKMFADSVYLHKKEGLTGLEP
TTLFEHYAAEKDSDAWTSPTEFH
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtcgctcctttggttgtcatgaatctgtcgagggtgaagttgtgttcgctacg
ggaatggtcggatatcccgaaagcttgaccgatccgtcctatcaaggacagattctcacc
gtaacaacgcccatggtgggaaactacggtgtgcccgatcgcaaggccgtcgacgagttg
ggtctgcccgcgtactttgaatcctcgcgcattcatgctaccggtttgattgttcaagat
tacagtcaccattactcgcactggaaggcagccagtagtctcggtgactggctcaaggag
gaaggaatccctggtctctccgacattgatactcgtatgttgaccaagaaaattcgtgaa
aagggagccatgctggctcggattgaagtggatctcgacgcccccgtgccagatttcggc
aaaatggtcgaccccaacgcgcgtcaccttgtcaacgaagttagtaccaaggaagtaaag
gtctacggaaagggcaatccgaccaaggttatcgccgtcgacggtgggatgaagttcaac
attattcgtcagctctgcaagcgtggcgtagaactcaccgtcgtaccctgggactacccc
tttgcttccgaaatgcacaagtacgatggtcttttcttgagtaatggtcccggtgatcct
gtcatgtgcgatgtgaccatcaaggaacttgaaaaagtcatttctgtcccggacagtgaa
gtcaaacccatttttggcatctgtctcggtaaccagttgatgggtatcgccgccggaggt
atcgccaagaagcttccctttggtaaccgaggtcagaatcagccggttctcaaccatcaa
acaggcgaatgctacattacgccgcaaaatcacggattccacattgactgcgccactctc
aagccgggatggaaaacgctgttcaccaacgccaacgacggatccaacgaaggtatcgct
cacgagactcgtccctacttcaccgcgcagttccatccggaagcctcgtctggtcccacc
gacacggagttcatgttcgatacctttctcgaagcgtgcaaaaagcccatggacaagatc
cgattcccagtccgcaaacccgctccacctcgctccaacgccaagaaagtcttgttgctc
ggatcgggtggtacctccatcggccaggctggtgaattcgactattccggcggacaagcc
attaaggccctaaaggaggaaggcttggaagtggtcctcatgaacccgaacattgcctcg
gtacagaccaatacggatgacaagtccgccagtaaggctgaccatgttttctttttgccc
gtcacccctgaatttgtcgaagaagtcatcaagaaggaaaagccggatggtgtcatcata
tccatgggaggacaaacggccttgaactgcgccgtccaaatgcacgaaagcggaactttc
gaaaaatatggtgtcaaaattcttggtacgcagattccagcggtcatcaacaccgaagat
cgtcagctcttttcggatcgcctcaacgaaattaatgaaaagattgccgagtcgtacacg
gcccaaactatcccagaggcggtggaacatgccaaaaaggttggctacccgctcatgatc
cgttccgcctttgccctgggaggactcggtagcggcatctgcgttgacgaagatcacttg
aaagacatggccaagaaggctctttctgtttcaccccagattctggtcgagaagagcatg
aagggatggaaagaagttgagtacgaggttgttcgtgatacgcacgacaactgtgtcact
gtttgcaacatggagaactttgatccacttggtatccacaccggtgatagtattgtcatg
gctccctcgcagactctgagcaacgaggaataccacatgctccgtgagactgctatcaag
gtcgttcgccacttgggaattgtgggggaatgcaacattcagtacgctcttcacccggaa
tcgctcgagtacgccattattgaggtcaacgcgcgtctttctcgttcttcagctttggcg
tccaaggctacaggatatcccttggctttcgttgccgctaagttatgcttgggtattcct
ttgacagaagttgtcaactctgtcaccaagaagacacaagctgcttttgagccttcgttg
gattatattgtcaccaagattcctcgttgggacatgtctaagtttgaaggcgtcagtacc
gagattggatccgctatgaagagtgtcggcgaagtcatgggcattggacggaccttggaa
gagtctttgcaaaaagcgttgcgcatggtggacccttcggttgctggcttccaacctaaa
aatcgtttcgagaccatggcggccttgcgcaaagaattggaggtgcctaccgataagcgc
atctttgcgattgcccaggctttgcatgagaagacgatgacggtccaggagatccacgac
atcaccaagattgatcattggttcctccgtcgtctcgaagacattgtcaaggtctgggac
gagctagagacaatcactctggaccaaatgagcgatgaccaaatgctgacggcaaagaag
atgggatactccgacgttcaaattgctgagtgcttaggtggaaattctacggaggacgat
gttcgtgccaaacgtatcgctggcggtatcctgcctttcaataagcagattgataccctc
gctgccgaataccccgcggagaccaactacttgtacatgacgtatcacggtatggaaaat
gatgttaaacccgccgatggtggtgtcattgtccttggaagtggagcttaccgcattggt
tcttcaattgagttcgattggtgtggtgttagttgcatccggactctccgccacttgggt
tacaagtcgacgatgatcaactacaatcccgagactgtgtcgactgattacgatgagtgc
gatcgtctgtactttgaagagctcagcaaggagcgtgttttggatatctaccaccgcgac
aaatcggatggtgtcattgttagtgttggaggacaaattcccaacggtctcgctattccg
ctcgacaaggctggcgtcaagattctcggaaccaccgccaaaatgatcgacaacgccgag
gaccgtaacaagttctccgacatgattgatgagattggtgtccagcaaccggcgtggcga
gagctcaccacttcacaggacgccttggactttgccgccaaggtcggctatcccgttcta
gtccgtccatcctatgttctttccggagccgccatgaatgttgcgtataacgatgaccag
ctccgtgcctgtttggaagaagctgctactgtatccaaggaacaccccgttgtgatttcc
gactttatcgaaggcgccgtcgagattgaatgcgatggtgtaggtaaagacggcgaactc
attgctgccgcaatccatgagcacattgaaaatgccggtgttcactctggtgatgcctcg
ttggtccttccaccccacactctgtcggcgtacaccaaagaacgagtccgcgaagccgcc
cgtaagattgtcaaacgcctcgacattactggaccggtcaacatccaattcgttgccaag
ggaaccgatgtcatgtgcatcgaatgcaacgtccgtgcctcccgctcatttccttttgtc
tccaaaacaatgggagttgactttattgaggccgccaccaaggccattgttggcgaagac
acgagtaacatgaacttgcctactttggaaacccgcgaccgtcccaacgggtttgtcggt
gtcaaggtcccgatgttctcctttgctcgtctccgtggatccgaccctgtactcggagtc
gagatggcctccaccggagaagtggcttgtttcggagcttccaaggaagaagccttcctc
aaggcacttctttcgaccggtttcaaaatgcccgaaaagaaaattctcgtttcggtccag
gaagaacttatcgacgagtttacgcattctgcttaccagctgcacgagctcgggtacacg
ctcgttgcaaccgaagcgactgccaaggctttggcaaagaaccgtgtgccttgcgaagtc
gtcgcttaccccacggacacctcgggtgctcgtacggcggtggacatgatccgggacgaa
gagattggcatggtgatcaatattcccacacaccagtccaagcgtttgaacgacaacttc
caaatgcgtcgatcagctgtggatttcggtacaccgctcttgactaacctcaacttggtc
aagatgtttgctgactctgtttaccttcacaagaaggaggggttgaccggcctcgaaccc
accactttgtttgagcactacgccgccgagaaggattccgacgcgtggaccagtcccact
gaattccattaa
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