KEGG   Phaeodactylum tricornutum: PHATRDRAFT_24439
Entry
PHATRDRAFT_24439  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PHATRDRAFT_24439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pti03019]
    PHATRDRAFT_24439
   03036 Chromosome and associated proteins [BR:pti03036]
    PHATRDRAFT_24439
Messenger RNA biogenesis [BR:pti03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PHATRDRAFT_24439
Chromosome and associated proteins [BR:pti03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    PHATRDRAFT_24439
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_RSE1_2nd Leo1
Other DBs
NCBI-GeneID: 7195971
NCBI-ProteinID: XP_002176606
JGI: 24439
UniProt: B7FNW4
LinkDB
Position
1:556530..557887
AA seq 357 aa
MSTFGNSSVASSSSSRSTSITPNDYSVPHAGNEGISSLNWSPTANILVSSNWDAGIRCWE
VQEQGGQVQANPKAQVNHEGSSPVLDTCFSADGNTVFSCGGDKAVRMWQLGSAPPNNIPQ
QIGAHDAPVQGVGFLRATNIVVSGGWDRKLKFWDCRQPTPVATLDMPERVYAMDVRDNLL
VVATAGRHIICYDVSGQPREYLRKESPLKYQTRCIACFPDQMGFAVGSIEGRVGIHYVQK
VAGRDSFAFKCHRQDSNAYSVNCIAFQKQFGTFATVGSDGIVNFWDKDNKQRLKGFNAIQ
RTISCAAFNEQGNLFAYASSYDWSQGSMHLQPGNEIFIHNVAEDEIRPKGKKASYKR
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgtcgacgttcgggaacagtagcgtcgcctcttccagtagctcgcggtcgacgtcgatt
acgccaaacgactatagcgtccctcatgcagggaacgaaggcatcagctccctaaactgg
agtccaacagcgaatatcttggtgtctagcaattgggacgcgggtatacgatgttgggaa
gtacaggagcaagggggccaagtacaagctaacccgaaagcacaagtcaatcacgaagga
agctctcctgtgctcgacacttgtttctccgcggacggaaatactgtgttttcctgcgga
ggtgacaaagcagttcgtatgtggcagcttggatccgcacctccaaacaacatcccccaa
caaatcggggcacacgatgcacctgtccagggtgttggattcctacgtgcgacaaacatt
gttgtgtccgggggttgggatagaaaacttaagttttgggactgtcgacagcctactccg
gtcgcgactcttgatatgccggaacgcgtgtacgcaatggatgttcgagataatttgtta
gtggtggcaacggctggtcgacatattatctgctacgatgtttcaggacagccgcgggag
tatttacgcaaggagtcgccgcttaaataccaaacgcggtgtattgcgtgctttccagat
caaatgggtttcgccgttggaagtattgaaggaagagttggaattcactacgtacagaag
gtagccggccgtgacagttttgctttcaaatgtcatcgccaagacagcaacgcatattcg
gtaaattgcatcgcatttcaaaagcagttcggtacttttgcgaccgtcggtagtgacggc
attgttaacttctgggacaaggataacaagcagcgtctgaaaggcttcaatgcgatccag
cgtacaatctcatgtgccgctttcaatgagcaaggcaacttgtttgcatacgcgagcagc
tatgactggagtcaagggagtatgcacttgcaacctgggaacgagatttttattcacaat
gtagccgaagatgaaattcgtccgaagggcaagaaagcgagctataaacgataa

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