KEGG   Phaeodactylum tricornutum: PHATRDRAFT_24922
Entry
PHATRDRAFT_24922  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03020  RNA polymerase
pti03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHATRDRAFT_24922
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHATRDRAFT_24922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pti03021]
    PHATRDRAFT_24922
   03400 DNA repair and recombination proteins [BR:pti03400]
    PHATRDRAFT_24922
Transcription machinery [BR:pti03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PHATRDRAFT_24922
DNA repair and recombination proteins [BR:pti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PHATRDRAFT_24922
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS DUF6510 PEX11 zf_Tbcl_2
Other DBs
NCBI-GeneID: 7196850
NCBI-ProteinID: XP_002177401
JGI: 24922
UniProt: B7FQG9
LinkDB
Position
1:complement(1917737..1918319)
AA seq 111 aa
MRFCPHDSSMLYPQEDKRNKILQYACRLCRYVESAPDQPLIYRNERKKEVGNILHTVPSS
ISDDPTLARSQKANCANCGRHEAVFFQSDVAQSDSLALIFVCCNCGHKWVN
NT seq 336 nt   +upstreamnt  +downstreamnt
atgcgcttctgtcctcacgattcttcaatgctgtatcctcaagaagacaaacgcaataaa
atactgcagtatgcgtgccgcttgtgtcgctacgtggagtcggcaccggatcaacctttg
atttatcgcaacgaacgcaaaaaggaagtgggaaatattttgcataccgtcccgtcgtca
atttcggatgatccgaccctggctcgatcgcagaaagccaattgtgccaactgtggacgt
catgaagcggtcttctttcaatccgacgttgcacaatcagactcactggcattaatcttt
gtctgttgcaattgtgggcacaagtgggtgaattga

DBGET integrated database retrieval system