Phaeodactylum tricornutum: PHATRDRAFT_25133
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Entry
PHATRDRAFT_25133 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14537
nuclear GTP-binding protein
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHATRDRAFT_25133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_25133
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-60S particles
GTPases
PHATRDRAFT_25133
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGP1NT
MMR_HSR1
FeoB_N
RsgA_GTPase
cobW
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
7197060
NCBI-ProteinID:
XP_002177845
JGI:
25133
UniProt:
B7FRR0
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Position
2:complement(14354..16444)
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AA seq
562 aa
AA seq
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MAKTGWKSGISNTSSAGKTNRTPKGNASSKLTQGRRRDKQPGSERSAETIQRLKMYSNGK
AIRNKAGKIVAGTFMMQDRAGDRKIEASTGRIQPDRRWFGNTRVVGATELDRFRQEMTEK
VADPYSVVLKRKKLPMGLLQDAAEYKAGNQKAALLEQEPFDQAFGKNSRRKRVKLDQLFV
QRAAESADSKEDIKTGEGEAIRSEGEGIDWRHEKKDDLFLKGQSKRIWGEFFKVVDCSDV
VLHIIDARNVPGTRCTMIERHIAKNASHKHLVFVLNKIDLVPNWVAKRWMGELAAVRPTI
AFHASLTNAFGKGALISLLRQFGKLHEDKKQISVGVIGYPNVGKSSVINTLISKKSCKVA
PIPGETKIWQYVTLFKRISLIDCPGVVVDTAGDTEEDSVLKGVVRAERLENPEDFIDAIM
GKVKREHIAAQYKLPKDGEETWSSSGELMEMIARRSGRLLKGGDPCIRTAALMIINDFQR
GRLPHFIPPPELKVEEDQKTVATEQAIQIEEQNLDDVVVVEKEMEQDEEGVETKTNDHAA
IADTETVIDTSSILIGDGKWDE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacaggatggaagtcggggatctccaatacttcctcagcgggaaaaaccaat
cggactcccaagggaaatgcgagttccaaactcacgcaaggccgacgccgcgacaagcaa
cccgggtcggagcgttccgcggaaacaatccagcgtttgaaaatgtattccaatggaaaa
gccattcgtaacaaggcggggaagattgtggcgggaacctttatgatgcaagaccgcgcc
ggtgatcgaaaaatcgaagcctccactggacgcatacaacccgatcgccgatggttcggg
aatacgcgcgtggttggtgccaccgaactcgatcgttttcgtcaagaaatgacggagaaa
gtggctgatccatactccgtagtccttaaacgcaaaaagctgccaatgggcctcttacag
gatgccgccgagtacaaggccggaaaccagaaagccgcgcttttagaacaagagccgttc
gatcaagcatttggaaagaattctcgtcgaaagagagtcaaacttgatcagcttttcgta
caacgcgcggctgaatcggcagacagcaaagaagacatcaagactggcgaaggagaggct
atacgctccgaaggcgagggcattgactggcggcatgagaagaaagacgatctcttcctt
aagggacaatcaaaacgaatttggggagagttctttaaagtcgtggattgttcagatgtt
gttttgcatatcattgatgctcgaaatgtaccgggtacccgctgtaccatgattgaacgt
catatcgccaaaaatgcttctcacaagcacttggtctttgttttgaacaagatcgatctc
gtgccgaactgggttgccaagcgatggatgggcgagttggctgccgttcgtccaaccatc
gcctttcatgcatcactaacaaatgcgtttggaaaaggggccttaataagcttactacga
cagtttggaaagcttcacgaagacaaaaagcaaatcagtgttggtgttattggctatccc
aatgttggcaaatcgtcggtcatcaatacactcatttcaaaaaaatcttgcaaagtggca
cccattcctggtgaaaccaaaatctggcagtatgttaccctcttcaaacgaatatccctt
atcgactgtcccggtgttgttgtcgatacagctggtgatacggaagaggattccgtgctc
aagggagtggttcgagcggagcgcttggaaaatccagaggactttatcgatgcgattatg
ggcaaggtgaaacgtgagcacattgcggcacaatacaagctaccaaaggatggagaggag
acatggagtagtagcggagagcttatggaaatgatcgcgaggcgatcaggtcgtttgcta
aagggtggtgacccctgtattcggactgcggcacttatgattatcaacgatttccaacgg
ggccgtctcccccattttattcctccacctgagcttaaggtagaggaagatcagaagaca
gttgctactgagcaggcaatccaaatcgaggagcagaatctggatgatgtggttgttgtc
gagaaagaaatggaacaagacgaagaaggtgtcgaaactaaaacgaatgatcatgcagcc
attgctgacacggagacagtaattgacacttcgagtatcttgatcggagacggtaaatgg
gacgaatag
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