Phaeodactylum tricornutum: PHATRDRAFT_25394
Help
Entry
PHATRDRAFT_25394 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_25394
Enzymes [BR:
pti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
PHATRDRAFT_25394
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PHATRDRAFT_25394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
PCMT
RsmF-B_ferredox
FtsJ
Methyltransf_31
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
7197483
NCBI-ProteinID:
XP_002178045
JGI:
25394
UniProt:
B7FSV0
LinkDB
All DBs
Position
2:complement(976636..978298)
Genome browser
AA seq
528 aa
AA seq
DB search
MVARHSSRNPSRGKKQKEKKVKPTPVPKPESSSDEESFGDEMEHRKDSKGSDSDRNSVSG
DDRNEEENVLVGEDEMASNPFFTDENANWLKPKGGKNKLLSSDEEESENEGDDDDDLLEV
EKEAQLVDEEMEAERLEADEEMRRTVRLHTSVYHLPTTEELQRDVDRVVPPSEIRSHIES
ILEVLADFKTRREPGRARKEYIDQLGLFLAEIQGYLPELIEYFLTMFGPAETVEFVNASD
KTRPLVIRANTLKTRRKDLAAALMKRGVTLDPLANWSKVGLKIMESPVPIGATPEYLSGM
YMLQSAASMCPVLALAPEPKERVLDMSAAPGGKTSYIAQLMRNTGTIVANDLKPERQKAT
VANMHRLGVKNVIACAHDGRKMGVMFKNRFDRILLDAPCSGLGVISRDPSVKVQRTIADV
NQCAHLQKELLLAAIDALKSKGTSGGFMVYSTCSVAVAENEEVVNYALSKRDIKIVDTGL
DFGKPGFTRYMQKRFHSSVALTRRFYPHVHNMDGFFVCKIQKLSDSRP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggtagctagacactcatccagaaatccaagtcgagggaagaagcagaaagaaaagaaa
gtgaagccgacacctgttcctaagcctgaaagtagcagcgacgaggaatcattcggagat
gaaatggagcaccgcaaggacagcaaagggagcgattcggatcgtaattctgtgagcggg
gatgatagaaatgaagaagaaaacgtcttagtcggggaagatgaaatggcgtccaatccg
tttttcaccgatgagaatgccaattggctcaaaccaaaaggtggaaagaataagttgcta
tcgtccgacgaagaagagtcagagaacgaaggcgatgatgacgatgaccttttggaagtt
gaaaaggaagctcagcttgtagacgaagaaatggaggcggagcgtttagaggcagacgag
gaaatgcgtcggacagttcgcctccacacgtcagtgtaccatttgccaacgacggaggag
ctacaacgagatgtagaccgagtggtccctccatctgagattcgctcacacattgaatca
atattggaagtcttggctgatttcaaaacccgccgggagcctggccgtgcccgtaaggaa
tacatcgatcaattgggtttatttttagctgaaatacaggggtatcttcctgagttgatc
gaatatttcctgaccatgtttggacctgctgaaacagtggagtttgtcaacgcatcggac
aaaacaagaccactggttatccgggccaatacgctcaagacgagaagaaaggatcttgcg
gcggctttgatgaagcgcggggtaacattggaccctctcgcaaattggtccaaggttgga
ctaaagattatggaaagtccagtccctattggcgcgacacccgaatacttaagtgggatg
tacatgctacaaagtgcggcatccatgtgtccagtgcttgcgttagctccggaacccaag
gagcgggttctagacatgtcggcagcccccggcggcaagacatcatacatcgctcagctc
atgcgcaatacgggcacgattgtggccaacgaccttaaaccggaacgtcaaaaagcgaca
gttgccaacatgcatcgtctcggtgttaagaacgtgattgcatgtgcccatgatggtcgt
aaaatgggcgtaatgtttaagaatcgctttgatcggatattgttggatgcgccatgttct
ggactgggcgtgattagtcgcgatcctagtgtcaaggtccagcgcacgattgcggatgtc
aaccagtgtgcgcatttgcagaaagaattgcttttggcagcaattgacgcactcaagagc
aaaggcacgtccgggggcttcatggtatactccacttgcagtgtcgcagtagccgagaat
gaagaagtggtgaattatgcgttatccaagcgagacatcaaaattgtggacacgggtctt
gattttggtaaacctggctttacccggtacatgcagaaacgatttcactcgtccgtggcc
ttgacacgtcgattctacccgcacgtacacaacatggacggctttttcgtctgcaagatc
caaaaattgagcgacagcagacct
DBGET
integrated database retrieval system
