Phaeodactylum tricornutum: PHATRDRAFT_26346
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Entry
PHATRDRAFT_26346 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHATRDRAFT_26346
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pti01007
]
PHATRDRAFT_26346
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_26346
Enzymes [BR:
pti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
PHATRDRAFT_26346
Amino acid related enzymes [BR:
pti01007
]
Aminoacyl-tRNA synthetase
Class I (G)
PHATRDRAFT_26346
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PHATRDRAFT_26346
Prokaryotic type
PHATRDRAFT_26346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1c
tRNA-synt_1f
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
7197892
NCBI-ProteinID:
XP_002178673
JGI:
26346
UniProt:
B7FUX6
LinkDB
All DBs
Position
4:complement(1259957..1262239)
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AA seq
647 aa
AA seq
DB search
MSADESLPATGTSGCPQPPWEKPTPAEVTHDPRLWITNSLTRQKEHFLTMDGSSRMVWYM
CGPTVYAPSHMGHARTYLGFDIIRRILERHFGYHVTLVMNVTDIDDKIIERAAEQHVGHL
QLARRYEAEFHQDMADLGVAPPTTLTRVTEYMDEVTAYIANIIQRGFAYESNGSVYFDVQ
TFSDTPHMHYCKLAPEQVGNAELLAEGEGKLTQDFVTDKQSPRDFALWKKTKPGEPSWDS
PWGPGRPGWHIECSVMASDVLDRLLQHRRMDLHSGGVDLKFPHHDNEMAQAEAECGETQW
VNYFVHAGHLHIKGLKMSKSLKNFITIQQALEINSARQIRMLFLLHKYNAQMDYGDNTMT
HAMETEKRFVEFFHNVKACLRQHRMDDSQKWDATTIRLQQTLAAAKTKVHDALRDDFDTP
TAMSVLVDLVRATNIYVEGDTVVNLVVRNVASYVTDIFRTFGLVGSEDVGFATESGGASR
EETLGPVLDALMNFRAAVRDKARSQDVGGVLDLCDAFRDLHLPNLGIRLEDKADGSVWKL
ADPAELLREMEQKEAEATRRAEEKALKASEDAQKEALNRLPPVEYMRQLTLEDNVTLMYS
QFDEDGIPTHDATGEPVNKNQGKKVQKLFKAQQGKYDKWIKSQSNDA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgacgagtcgttaccggcgacggggaccagtggatgtccccaaccgccgtgg
gaaaaacccacgcctgcggaagtcacgcacgatccgcgactctggattaccaactccttg
acccgacaaaaggaacactttctcaccatggacggatcctcccgcatggtatggtacatg
tgcggacccaccgtatacgctccttcgcacatgggacacgcccggacctatctcggtttc
gacattatccgacgcattctcgaacggcactttggctaccacgttactctcgtcatgaac
gtgaccgacattgatgacaagatcattgagcgggcggccgaacagcacgtgggtcacctc
caactggcgcgtcgctacgaagccgaattccatcaggacatggccgatctaggtgtcgca
ccgcccaccacactcacccgcgtcaccgaatacatggacgaagtcaccgcatacattgcc
aacattatacaacgcggattcgcctacgaatcaaacggcagcgtctattttgacgtacag
acattctccgacaccccccacatgcactactgtaaactcgcccccgagcaagtcggcaac
gccgaactattggccgaaggcgaaggtaaactcacgcaagactttgtcacggacaaacag
agtccccgcgattttgcactctggaaaaagaccaaacccggggaaccctcctgggattca
ccatggggacccggacgacccggatggcacattgaatgctccgtcatggccagtgacgtc
ctggatagactcctccaacaccgacgcatggacctgcattccggcggcgtcgatctcaaa
tttccacaccacgacaacgaaatggcacaggccgaggccgaatgcggcgaaacacagtgg
gtcaactactttgtacacgccgggcacttgcacattaaaggactcaaaatgtccaaatca
ctcaagaactttatcaccatccaacaagcgctcgaaattaactcggcacggcaaatacgc
atgctttttcttctccacaaatacaacgcgcagatggattacggcgacaacaccatgacc
cacgccatggaaacggaaaaacgtttcgtcgaattcttccacaacgtcaaagcgtgtttg
cggcaacaccgcatggatgattcgcaaaaatgggatgccaccaccattcggctccaacag
acactagccgcggcgaaaaccaaagtccacgacgctctgcgggacgactttgatacacca
accgccatgtcggtcctcgtcgatctcgtgcgggcaaccaacatatacgtggagggcgat
accgtcgttaatttggtcgtccgtaacgtggcctcctatgtgacggacatttttcgaacg
tttggactcgtgggcagcgaggatgtgggatttgccacggaatccggtggcgcaagtcga
gaggaaacgctcggccctgtcctggacgctctcatgaactttcgggcggcggtccgagac
aaggcgcgttcacaagacgttggaggagtactcgacctctgcgacgcctttcgcgatctg
cacctacccaacctcgggattcgtctcgaagacaaggccgatgggtcggtttggaaactg
gctgatccggcggaactcttgcgagaaatggaacaaaaagaagcggaggcgacgcgacgc
gcggaagaaaaggcgctcaaagcttccgaagatgcgcaaaaggaagccctcaatcggcta
cccccggtcgagtacatgcggcaattgacgctggaagacaatgtcacgctcatgtactcc
caatttgacgaggatgggattcccacccacgacgcgaccggagagcctgtgaacaagaat
caaggaaagaaggtgcaaaaactgttcaaggcacaacagggcaagtacgataagtggatc
aagtcgcaatccaacgacgcatag
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