Phaeodactylum tricornutum: PHATRDRAFT_26853
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Entry
PHATRDRAFT_26853 CDS
T01075
Symbol
helicase_6
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_26853 (helicase_6)
Enzymes [BR:
pti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHATRDRAFT_26853 (helicase_6)
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-60S particles
Helicases
PHATRDRAFT_26853 (helicase_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
7200275
NCBI-ProteinID:
XP_002179259
JGI:
26853
UniProt:
B7FX19
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All DBs
Position
6:645264..646839
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AA seq
476 aa
AA seq
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MVNPTKKGGSSGGNGFKALGLSDEVYKGIIRMGFRMPTPVQRKSLPVVLTGVDTVVMART
GSGKTCAFLIPLLEKLLDTPKGQNGNHVRGVILSPTRELSQQTLRVMNKLAADTDIRSIG
IHGGEGMEKQFNQLASKPDVIIATPGRLAHHLSEIPDFKLAGCAMCILDEADRLLEMGFS
MQIRQIARSMPETCQKVMLSATMPKVLVEFTKSGFAVDPAVVRLDQEASVSEELRIAFIT
CRSLDKDAALLHVLHHIKEDQEEHADSRTGLSLIFAATRHHVEYVTTLLIAAGFDAVMIY
GTLDQEARKINLAAFRSGKRPILVTTDVAARGIDVPLIDHVIHYHFPSSPKLFVHRSGRA
ARAGRIGYCWGLIEPDELPYMIELHLFLGRKPMSAEQKTDDGKTIETTYTLNEMSPDMVH
YGCVPESILTMEVENVQRIMDSELSGSLEAESLRALTKVCKNAMKQYRRTRTEASR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacccaacgaaaaaagggggtagcagcggaggcaatggttttaaagcgttagga
ctatctgatgaagtctacaaggggattatccggatgggatttcgaatgcctacgccggtg
cagcggaagtctttacctgttgttttgactggtgtcgatactgtagtaatggccagaact
gggtctggaaaaacgtgtgcttttctgattccgctactggaaaagctattggatacacca
aagggtcaaaacggcaaccatgtgcgaggtgttattctttcacctacacgcgagctgtct
caacaaacgctaagggtcatgaataagttggcggcagacacagacatccggtccatcggt
attcacggaggagaaggaatggaaaaacaattcaatcaactcgcctccaagccagatgtg
attatcgcgacacctggtcgcttggcacatcacttgtccgaaattccggattttaagctt
gcaggatgcgccatgtgcatcctggatgaggcggatcgattgttggaaatgggcttttct
atgcaaatccgtcaaattgctcgcagtatgccagaaacctgccagaaagttatgttgtcc
gccacgatgcctaaagttctagtagagtttacaaagtccggttttgcagtagatcctgcg
gttgttcgtttggatcaggaagcgagcgtttcggaagagcttcgcattgcgttcattacg
tgtcgtagtcttgacaaggatgccgcacttcttcacgttttgcaccatattaaagaagac
caggaagagcacgcagacagtcggaccggattatcccttatttttgccgctactagacac
cacgtcgagtatgttacaactctactaatagcggcaggttttgatgctgtaatgatctat
ggaactctggatcaagaggctcgtaagataaatctcgcagccttcagaagcggaaagaga
cctatcttggtgacaacagatgttgccgctcgtggaatcgacgtaccgctcatcgatcac
gtcatccactaccattttccttcatctccgaaattgtttgttcatcgatctggacgagcg
gcacgcgcagggcgaattgggtattgttggggtttgatagagccagacgagttgccatac
atgattgaactacacctttttctcggaagaaaaccaatgtcggcagaacagaaaaccgat
gatggaaaaacaatagaaacaacgtatacgctcaatgagatgtcgcccgatatggttcac
tatggatgcgtccccgaatcaatcttaaccatggaagttgaaaacgttcaacgtatcatg
gactcggagctaagtgggtcgttggaagctgaatcactccgtgctctgacaaaagtttgc
aagaacgccatgaaacaatatcgccggactcgaaccgaagctagtcgt
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