Phaeodactylum tricornutum: PHATRDRAFT_27118
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Entry
PHATRDRAFT_27118 CDS
T01075
Symbol
UBI3
Name
(RefSeq) ubiquitin extension protein 3
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03010
Ribosome
pti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PHATRDRAFT_27118 (UBI3)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHATRDRAFT_27118 (UBI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pti03011
]
PHATRDRAFT_27118 (UBI3)
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_27118 (UBI3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_27118 (UBI3)
Ribosome [BR:
pti03011
]
Ribosomal proteins
Eukaryotes
Small subunit
PHATRDRAFT_27118 (UBI3)
Archaea
PHATRDRAFT_27118 (UBI3)
Ubiquitin system [BR:
pti04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
PHATRDRAFT_27118 (UBI3)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_27118 (UBI3)
Exosomal proteins of colorectal cancer cells
PHATRDRAFT_27118 (UBI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Dsc3_N
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
7200607
NCBI-ProteinID:
XP_002179851
JGI:
27118
UniProt:
B7FY02
LinkDB
All DBs
Position
7:complement(467666..468323)
Genome browser
AA seq
155 aa
AA seq
DB search
MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKRKKKVYTKPKKVKRVNKTIPLQTLKYYRVESDGKVTRLRKY
SPVAGIGCFMAQHVDRYYCGKSGTTFMYDDMKESE
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttcgtcaaaactctgacgggaaagaccatcacccttgatgtcgaacccagt
gatacgatcgacaacgtcaaaactaagatccaggacaaggaaggcattcctccggatcag
caacgattgatctttgctggcaagcaactggaagatggccgtacactgtcggactacaac
attcagaaagaatccacccttcatttggtgcttcgtctacgtggaggaggtaagaaacgt
aaaaagaaggtctacaccaagcccaagaaggtcaagcgcgtcaataagaccattccgttg
caaactctcaagtattaccgggtggaatcggacggcaaggtcactcgcctccgaaagtac
agccccgtcgctggcattggatgcttcatggcacaacacgttgatcgttactactgtgga
aagtcgggaaccaccttcatgtacgatgatatgaaggaaagcgagtaa
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integrated database retrieval system