Phaeodactylum tricornutum: PHATRDRAFT_27375
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Entry
PHATRDRAFT_27375 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHATRDRAFT_27375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_27375
03110 Chaperones and folding catalysts [BR:
pti03110
]
PHATRDRAFT_27375
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_27375
Enzymes [BR:
pti01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
PHATRDRAFT_27375
Spliceosome [BR:
pti03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PHATRDRAFT_27375
Complex C
U4/U6.U5 tri-SnRNP related factors
PHATRDRAFT_27375
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
PHATRDRAFT_27375
Chaperones and folding catalysts [BR:
pti03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
PHATRDRAFT_27375
Ubiquitin system [BR:
pti04121
]
Ubiquitin ligases (E3)
U-box type E3
PHATRDRAFT_27375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
7201095
NCBI-ProteinID:
XP_002180241
JGI:
27375
UniProt:
B7FYW9
LinkDB
All DBs
Position
8:complement(461099..463118)
Genome browser
AA seq
537 aa
AA seq
DB search
MVKKQKEKQYQSAREHRWTSQVRSGSALQATASAVQRRLPFSHCALGLTPYEHPVCTRQG
IVFENSSLLPFLMKHKTDPVTGEPATSRDIVTLHMDKDEEGRWQCPVLTKPFYDHTKIVA
ILQPGGNEANVYSYEAYRELNLKAKNFEDLISGQKFSSKTDVIILNDPSDEAFNQRKDIN
RFYHIKHSRELEKDKGNTGTVRHSLTATRVMEQLNKNKAISETAAQKKRVAPATSSGDSK
RPRILAKDVTGVQYTTGKGAASFTSTAFEVSQINQDRDATEEEIREAQFRVMRKMKKKGY
VRLRTTLGDLTLELHCEMVPRTCANFLGLCEQKMYDGTEFHRLIPNFMIQGGKCKDGPDE
SVWGGTLADEFDERLKHTGGGVVSMANAGPNTGTRQFFITYKSCNHLDRKHSVFATVIDG
MEVLKLTEKVGRDKKERPLEKIMIFGTDVLANPCKEATEKEEERIRLLVEARTPNHENSL
FEKPKETRGQPSQEVGRYLRDKVKSFKPATVENAGTTIPSRLPPPPKSTSFGNFGGW
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagaagcaaaaagagaaacagtaccagtcggcgagggagcatcgatggacctca
caagttcgctccggttcggcactacaagcgaccgcgtcggctgtccaacgacgactgccc
ttttcgcactgcgcgttaggcttgacaccgtacgaacatcccgtgtgtacacgacagggt
attgtatttgaaaattcttccttactaccgtttctaatgaagcacaagacggacccagtg
actggagaaccagcaacatcgcgagatattgtcaccctgcatatggacaaggacgaggaa
gggcgttggcaatgcccggttttgacaaagcctttttatgatcacaccaaaattgtagct
attctgcagccaggagggaacgaagccaacgtctattcttacgaagcataccgcgagctg
aatctcaaagcaaaaaactttgaagatctcatttcgggacagaaattcagtagcaaaact
gatgtcatcattctcaacgacccgagcgacgaagctttcaatcagcgcaaggacatcaat
cggttctatcatatcaagcattcacgtgagctggaaaaggataagggaaacaccgggacg
gtccggcatagtttgacggccacgagagtgatggaacagctgaacaagaataaagctata
tcggaaacagcagctcaaaagaagcgagtagctcctgccacctcatcgggagacagcaaa
cgcccaagaatactggcaaaagatgtgacaggggtccaatacacaactggcaagggcgcg
gcctcgttcacgtcaaccgcgtttgaagtctcccagataaaccaagaccgtgatgcgacc
gaagaagaaattcgagaagctcaatttcgcgtgatgcgtaaaatgaaaaagaagggatac
gtccgattacgaacaacgttgggggatctaacactcgaactgcattgtgagatggttcca
cgaacgtgtgccaactttttgggactgtgcgaacagaagatgtatgacggaacagaattt
caccgccttatccccaacttcatgatccaagggggcaagtgcaaggatgggccggacgaa
agcgtctggggtggaacactggctgacgaatttgacgagcgattgaagcatacgggtggg
ggtgttgtctcaatggcaaatgcgggaccaaatactggaacgcgacagtttttcattacc
tacaagagttgtaatcacttggaccgaaaacacagcgtgtttgcgacagtgatcgatggc
atggaagtccttaaattgacggaaaaggtcggaagagacaaaaaggaaaggcctttagaa
aagattatgatcttcggaactgacgtgttagcgaacccatgcaaagaagccacagaaaag
gaagaagagcggatccgactactcgtggaggcccgaacacccaaccatgaaaatagtctt
ttcgagaagccgaaggagacgagggggcagccatcgcaggaagttggccggtatttacgg
gacaaagtgaagtcgttcaagccggcgacggtggaaaacgccggaaccacgattccgtct
cggctgccacctccaccaaagtcaacctcttttggaaactttggcggatggtga
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