Phaeodactylum tricornutum: PHATRDRAFT_28730
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Entry
PHATRDRAFT_28730 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PHATRDRAFT_28730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pti03021
]
PHATRDRAFT_28730
03110 Chaperones and folding catalysts [BR:
pti03110
]
PHATRDRAFT_28730
Enzymes [BR:
pti01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
PHATRDRAFT_28730
Transcription machinery [BR:
pti03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PHATRDRAFT_28730
Chaperones and folding catalysts [BR:
pti03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
PHATRDRAFT_28730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
Motif
Other DBs
NCBI-GeneID:
7202453
NCBI-ProteinID:
XP_002181757
JGI:
28730
UniProt:
B7G3B3
LinkDB
All DBs
Position
13:complement(582347..582815)
Genome browser
AA seq
115 aa
AA seq
DB search
MTQVRAAHLLIKHTGSRNPVSRRTGEQVTLSPEQARQELESYQHRIIAEGLDEAFPKYAT
SRSDCGSFSNQGDLGFFGPGQMQRPFEEAAFALQPGEMSGIVSSDSGVHLIYRIA
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagtccgtgcagctcatcttcttatcaagcacactggaagtcggaatcccgtc
tcccgtcgcaccggcgagcaagttacgctgtcaccagaacaagctcgccaagaactggaa
tcgtaccaacatcgtatcattgctgaaggattggacgaagcctttcccaaatacgccaca
tcacgttctgattgtggttcgttctcgaaccaaggagatctaggattttttggaccaggg
caaatgcagcgtcctttcgaagaagcagctttcgcgttgcaaccgggtgaaatgagcggg
atcgtttcttccgatagtggtgttcatcttatctaccgcatcgcttaa
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