KEGG   Phaeodactylum tricornutum: PHATRDRAFT_28874
Entry
PHATRDRAFT_28874  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03250  Viral life cycle - HIV-1
pti03272  Virion - Hepatitis viruses
pti04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    PHATRDRAFT_28874
   03272 Virion - Hepatitis viruses
    PHATRDRAFT_28874
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    PHATRDRAFT_28874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pti04131]
    PHATRDRAFT_28874
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pti04147]
    PHATRDRAFT_28874
Membrane trafficking [BR:pti04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    PHATRDRAFT_28874
Exosome [BR:pti04147]
 Exosomal proteins
  Proteins found in most exosomes
   PHATRDRAFT_28874
SSDB
Motif
Pfam: UEV Vps23_core UQ_con HH_RND_rel
Other DBs
NCBI-GeneID: 7202811
NCBI-ProteinID: XP_002182028
JGI: 28874
UniProt: B7G481
LinkDB
Position
14:complement(222620..224271)
AA seq 410 aa
MRSACCIPDSCGCPLSSSCFPTGHPSCVYSTRYRIFQRSLDSSIPNSPQFPMVNDPRVTE
QLSHLGGVYRDPARVDRDATALLRSSVGERLTPIAAELYEDNGSHSTVLVLQGMIAVDFR
GTTYRQLMEIYLPGRYPQRPPVCYVRLAEHIYLKNNHEHVGSDGKVDIPYLDEWTSHHHN
LVELVIQMSSVFSADPPVFSRTSAATPPPPAYAAAAVYNDTRSSTTTTNSNHAWEERRID
QLRQNLTFKTQRHFVELSKETQQQVQADERHKQLLIHAESKIDAQIKALEKEKETLERHL
STTREKTIAIKAWVRSHKERLAESKEAEAVPADKLVQPASELHGQMLALAAENAALTDVL
YFLDRGLYAGKLDAVAHLKQVRKLAKKQFLVQAHLIKINQVLLDRSNSRR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgcgttcagcctgctgcattcctgattcttgtggttgtcctttatcttcctcctgcttc
ccgacaggtcatccatcgtgtgtctactctactagataccgcatattccaacgcagtttg
gatagttccattcctaactctccacaattccccatggtgaacgatccgcgggtgacggag
cagctttcgcatttggggggagtctaccgcgatcctgcacgggtggatcgggacgccacg
gcgttgttgcgatcgagcgtcggggagcgcttgactcccattgcggcggaattgtacgaa
gacaatggttcccattccaccgtgctggtcttgcagggcatgatcgccgtggactttcgt
ggcacaacgtaccgccaactgatggaaatatacctacccgggcgctacccccagcgtcca
cccgtatgttacgtgcgtttggccgaacacatttatttgaaaaacaatcacgagcacgtg
ggttcggatgggaaagtcgatatcccctatttggacgaatggacatcgcatcaccacaat
ttggtggagttggtcattcaaatgagttcggttttttccgcggacccgccagtcttttcc
cgcacatcagccgccacgcccccaccgccagcctacgccgccgctgccgtttacaatgat
acacggagcagtacaacgacaacgaatagcaaccacgcttgggaagaaaggagaatcgac
caattgcgccaaaatttgactttcaagacccaacgccattttgtggaactctctaaagaa
acacaacagcaagtgcaagcggatgagcgtcataaacagttgttgatccatgcagaaagc
aagattgacgcgcaaatcaaagccctggaaaaagagaaggagaccttggaaaggcatttg
tccacgacacgcgagaaaaccattgctattaaagcttgggtacggtcgcacaaagaaagg
ctggccgagtccaaggaggctgaggctgtaccggctgacaagctggtgcagccggccagt
gagctgcacggacaaatgctggctctggcagccgaaaacgcggcattgacggacgtcctt
tattttctcgaccgtggtttgtacgcgggcaagctagacgccgtggcccatctcaaacag
gtacggaaactcgccaaaaagcagtttctggtccaggcgcatcttatcaagatcaatcaa
gtacttctggacagaagtaatagtcgtagatga

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