Phaeodactylum tricornutum: PHATRDRAFT_28874
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Entry
PHATRDRAFT_28874 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03250
Viral life cycle - HIV-1
pti03272
Virion - Hepatitis viruses
pti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PHATRDRAFT_28874
03272 Virion - Hepatitis viruses
PHATRDRAFT_28874
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PHATRDRAFT_28874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_28874
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_28874
Membrane trafficking [BR:
pti04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
PHATRDRAFT_28874
Exosome [BR:
pti04147
]
Exosomal proteins
Proteins found in most exosomes
PHATRDRAFT_28874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
HH_RND_rel
Motif
Other DBs
NCBI-GeneID:
7202811
NCBI-ProteinID:
XP_002182028
JGI:
28874
UniProt:
B7G481
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All DBs
Position
14:complement(222620..224271)
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AA seq
410 aa
AA seq
DB search
MRSACCIPDSCGCPLSSSCFPTGHPSCVYSTRYRIFQRSLDSSIPNSPQFPMVNDPRVTE
QLSHLGGVYRDPARVDRDATALLRSSVGERLTPIAAELYEDNGSHSTVLVLQGMIAVDFR
GTTYRQLMEIYLPGRYPQRPPVCYVRLAEHIYLKNNHEHVGSDGKVDIPYLDEWTSHHHN
LVELVIQMSSVFSADPPVFSRTSAATPPPPAYAAAAVYNDTRSSTTTTNSNHAWEERRID
QLRQNLTFKTQRHFVELSKETQQQVQADERHKQLLIHAESKIDAQIKALEKEKETLERHL
STTREKTIAIKAWVRSHKERLAESKEAEAVPADKLVQPASELHGQMLALAAENAALTDVL
YFLDRGLYAGKLDAVAHLKQVRKLAKKQFLVQAHLIKINQVLLDRSNSRR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcagcctgctgcattcctgattcttgtggttgtcctttatcttcctcctgcttc
ccgacaggtcatccatcgtgtgtctactctactagataccgcatattccaacgcagtttg
gatagttccattcctaactctccacaattccccatggtgaacgatccgcgggtgacggag
cagctttcgcatttggggggagtctaccgcgatcctgcacgggtggatcgggacgccacg
gcgttgttgcgatcgagcgtcggggagcgcttgactcccattgcggcggaattgtacgaa
gacaatggttcccattccaccgtgctggtcttgcagggcatgatcgccgtggactttcgt
ggcacaacgtaccgccaactgatggaaatatacctacccgggcgctacccccagcgtcca
cccgtatgttacgtgcgtttggccgaacacatttatttgaaaaacaatcacgagcacgtg
ggttcggatgggaaagtcgatatcccctatttggacgaatggacatcgcatcaccacaat
ttggtggagttggtcattcaaatgagttcggttttttccgcggacccgccagtcttttcc
cgcacatcagccgccacgcccccaccgccagcctacgccgccgctgccgtttacaatgat
acacggagcagtacaacgacaacgaatagcaaccacgcttgggaagaaaggagaatcgac
caattgcgccaaaatttgactttcaagacccaacgccattttgtggaactctctaaagaa
acacaacagcaagtgcaagcggatgagcgtcataaacagttgttgatccatgcagaaagc
aagattgacgcgcaaatcaaagccctggaaaaagagaaggagaccttggaaaggcatttg
tccacgacacgcgagaaaaccattgctattaaagcttgggtacggtcgcacaaagaaagg
ctggccgagtccaaggaggctgaggctgtaccggctgacaagctggtgcagccggccagt
gagctgcacggacaaatgctggctctggcagccgaaaacgcggcattgacggacgtcctt
tattttctcgaccgtggtttgtacgcgggcaagctagacgccgtggcccatctcaaacag
gtacggaaactcgccaaaaagcagtttctggtccaggcgcatcttatcaagatcaatcaa
gtacttctggacagaagtaatagtcgtagatga
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