Phaeodactylum tricornutum: PHATRDRAFT_29212
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Entry
PHATRDRAFT_29212 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K13137
serine-threonine kinase receptor-associated protein
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_29212
Spliceosome [BR:
pti03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
PHATRDRAFT_29212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT140_2nd
RMC1_N
WD40_RFWD3
WD40_like
Beta-prop_WDR35_TULP_N
DUF7586
Motif
Other DBs
NCBI-GeneID:
7202997
NCBI-ProteinID:
XP_002182271
JGI:
29212
UniProt:
B7G5M1
LinkDB
All DBs
Position
15:652887..654737
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AA seq
317 aa
AA seq
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MANDSKNTRKIPIVCPGHTRPLAELQFCYIAPEQRTFLVSACHDRLPMLRDGTSGDWIGT
FVGHKGAVWSCRMDPSGSLAATASGDFSVHVWDAITGKDLFQLPHKHIVKTCDFSPNSKY
LATGGHEGILRIYDLTQPEQAPITIPQDPSKKITITKCNWLSEDLLIVGCGDGKIRFWQP
LAQGGPATVPVHTMSTEGTSEIRDMEVSRTTAGQDVLTVAAGERVYFFDLQTRTCLKSYK
MPIHFREEGGASLHPSGNKFVAGGSDLWVRVFDYQTGEELELNKGHHGPIRCIRYSPTGE
SYATGSEDGTIRLWKTD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgatagcaaaaacactcgcaagatccccatcgtatgtcccgggcatactcga
ccgcttgcggaactccagttttgttacattgctccggaacaacgaacgtttctggtttcg
gcctgtcacgatcggctgcccatgttgcgagacggcacgagcggggactggatcgggacg
tttgtgggtcacaaaggtgccgtttggagttgccggatggatccgtcgggtagtttggct
gcgacggcaagcggcgactttagcgtgcacgtgtgggacgctattacgggaaaggatctg
tttcaactgccacacaagcacattgtcaagacgtgcgacttttcgcccaactcgaaatat
ttggcaaccgggggacacgaaggcattctacgaatttacgatttgacacaaccggagcaa
gctccgattaccatcccgcaagacccgtctaaaaagattacgattaccaagtgcaactgg
ttgtcggaggacttgctcatcgtgggctgcggggatgggaaaattcggttctggcagcct
ctggcgcagggcggtccggcaacggttcccgtacacaccatgtccaccgaaggcaccagc
gaaatccgagacatggaggtctcacggactacagccggtcaagacgttttaacggtagcc
gctggggagcgcgtttatttctttgacctgcaaacacggacttgcctcaagtcctacaaa
atgcccattcactttcgggaggaaggcggagcttcgttacatccgtccgggaacaagttc
gtggccggtggaagcgatttgtgggttcgtgtctttgattatcaaactggagaagaactc
gaactcaacaagggacaccacggtcccattcgctgtatccgttacagcccgaccggcgag
agctacgccactggctctgaagacggtacaatccgtctctggaagacagattaa
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integrated database retrieval system