KEGG   Phaeodactylum tricornutum: PHATRDRAFT_29212
Entry
PHATRDRAFT_29212  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K13137  serine-threonine kinase receptor-associated protein
Organism
pti  Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pti03041]
    PHATRDRAFT_29212
Spliceosome [BR:pti03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    PHATRDRAFT_29212
SSDB
Motif
Pfam: EIF3I WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT140_2nd RMC1_N WD40_RFWD3 WD40_like Beta-prop_WDR35_TULP_N DUF7586
Other DBs
NCBI-GeneID: 7202997
NCBI-ProteinID: XP_002182271
JGI: 29212
UniProt: B7G5M1
LinkDB
Position
15:652887..654737
AA seq 317 aa
MANDSKNTRKIPIVCPGHTRPLAELQFCYIAPEQRTFLVSACHDRLPMLRDGTSGDWIGT
FVGHKGAVWSCRMDPSGSLAATASGDFSVHVWDAITGKDLFQLPHKHIVKTCDFSPNSKY
LATGGHEGILRIYDLTQPEQAPITIPQDPSKKITITKCNWLSEDLLIVGCGDGKIRFWQP
LAQGGPATVPVHTMSTEGTSEIRDMEVSRTTAGQDVLTVAAGERVYFFDLQTRTCLKSYK
MPIHFREEGGASLHPSGNKFVAGGSDLWVRVFDYQTGEELELNKGHHGPIRCIRYSPTGE
SYATGSEDGTIRLWKTD
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcgaacgatagcaaaaacactcgcaagatccccatcgtatgtcccgggcatactcga
ccgcttgcggaactccagttttgttacattgctccggaacaacgaacgtttctggtttcg
gcctgtcacgatcggctgcccatgttgcgagacggcacgagcggggactggatcgggacg
tttgtgggtcacaaaggtgccgtttggagttgccggatggatccgtcgggtagtttggct
gcgacggcaagcggcgactttagcgtgcacgtgtgggacgctattacgggaaaggatctg
tttcaactgccacacaagcacattgtcaagacgtgcgacttttcgcccaactcgaaatat
ttggcaaccgggggacacgaaggcattctacgaatttacgatttgacacaaccggagcaa
gctccgattaccatcccgcaagacccgtctaaaaagattacgattaccaagtgcaactgg
ttgtcggaggacttgctcatcgtgggctgcggggatgggaaaattcggttctggcagcct
ctggcgcagggcggtccggcaacggttcccgtacacaccatgtccaccgaaggcaccagc
gaaatccgagacatggaggtctcacggactacagccggtcaagacgttttaacggtagcc
gctggggagcgcgtttatttctttgacctgcaaacacggacttgcctcaagtcctacaaa
atgcccattcactttcgggaggaaggcggagcttcgttacatccgtccgggaacaagttc
gtggccggtggaagcgatttgtgggttcgtgtctttgattatcaaactggagaagaactc
gaactcaacaagggacaccacggtcccattcgctgtatccgttacagcccgaccggcgag
agctacgccactggctctgaagacggtacaatccgtctctggaagacagattaa

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