KEGG   Phaeodactylum tricornutum: PHATRDRAFT_29317
Entry
PHATRDRAFT_29317  CDS       T01075                                 
Symbol
CUL1_3
Name
(RefSeq) CULlin protein 1
  KO
K03347  cullin 1
Organism
pti  Phaeodactylum tricornutum
Pathway
pti04120  Ubiquitin mediated proteolysis
pti04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    PHATRDRAFT_29317 (CUL1_3)
   04120 Ubiquitin mediated proteolysis
    PHATRDRAFT_29317 (CUL1_3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pti04121]
    PHATRDRAFT_29317 (CUL1_3)
Ubiquitin system [BR:pti04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     PHATRDRAFT_29317 (CUL1_3)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6323 EF-hand_7 MerR_2
Other DBs
NCBI-GeneID: 7203466
NCBI-ProteinID: XP_002182637
JGI: 29317
UniProt: B7G601
LinkDB
Position
16:complement(211446..214254)
AA seq 741 aa
MSGNASGIIPLEEGWNDEIKAKAIDKLEAMLNGGLKSGETNMFGPREYVQIYTTCYDMCT
QRSPYNWSRELYQRHGETIERYLASTVIPALRDKTGQGGTTLLTELQHRWGDHQIMNKWL
KKFFTYLDRYYVKHHSLPTLSQAGLRCFRTHVYDEMKRETTAAILGLINDEREGQIIDKS
LVKSIVELYENMGMGSLDAYNGDLEEPLLQSTREFYAKRREEWINDSTPDYLVKAEEALQ
EERSRVADYLSSSSEPKILRVVEEEILEKVELVLLEKETSGCRALLQNDKSEDLSRMFRL
FQRLENGLTPIAAIVQEFITSMGQEILKRRQARLDGGEKDKNDDPKFVKAIIELHEKYLG
VVKKDFSGHSLFQKALKDAFVEIVNKNVGSFTNAELMSTFCDRILKSGGEKLSEAEVEES
LDRIVQLFSYLTDKDLFAEIYRNQLSKRLLNQRSTSDDAEKLMIAKLKVQCGTQFTSKME
GMLADLAVGSQQRTEFEQRMRQVETSLDFSVQVLTTGFWPTYKSPQVTLTEEMNKCMKVF
REWHELKHQKRKLGWVLTQGSATVRGTFGKKSYEIQVSTLQAIALDALSGGETLSFEDLS
QRLNLEETILKPLMHSLSCGKYKVIAKTPASNKINTTDKFTANAKFSSNMRKIRIPMASL
DANFNTKKVEEDRSIAIEAAIVRIMKARKTLQHQQLLSEVLAQLSFFNPNPRVVKKRIEA
LIDREYLERGTDNPGVYNYLA
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgtccgggaacgcttcgggcattattcctttggaagaggggtggaacgatgaaatcaaa
gccaaggccattgataagctcgaagccatgctcaacgggggtctgaaatcgggtgaaaca
aatatgtttggtccacgggaatatgtgcagatttacacgacttgttacgatatgtgcacc
caacgttctccgtacaactggtcgcgcgaactgtatcaacgacacggcgaaacgattgaa
cgataccttgccagcacggtgattcccgcgttgcgggacaagactggtcagggcggtacc
acgctccttactgaactccagcaccgctggggggatcatcaaattatgaacaagtggttg
aaaaagttctttacctatctagatcgatactatgttaagcatcacagtttgcccacgctc
tcacaggccggtctacgatgcttccgtactcacgtgtacgatgagatgaagcgcgagacc
accgcggcgattctaggtctcatcaacgacgaacgtgaaggacagattattgacaaaagt
ctcgtcaagtcgatcgtggaattatacgaaaatatgggtatgggctctctggatgcgtac
aacggtgatctggaagaacccttgttgcagtcgacgcgggagttttatgcaaaaaggcgt
gaggagtggatcaatgattcgactccggattatctcgtcaaggcggaagaggcgctgcaa
gaagaacgctcccgtgttgcggattatctttcgtcgagttcggaacctaaaatactcaga
gtggttgaggaagagattcttgaaaaagtagaacttgtcttgttggaaaaggaaacatct
ggttgccgcgcattgttgcaaaacgacaagtccgaagacttgagtcgtatgtttcggttg
ttccaacgtttggaaaacggtcttactccaatcgccgcaattgttcaggaattcatcaca
tccatgggtcaagaaattctgaaacggcgtcaggcccgtttggatgggggcgaaaaagac
aaaaacgatgatcccaaattcgtcaaggcgattatcgagctgcacgaaaagtaccttggc
gttgtcaaaaaagacttcagtgggcattctctttttcaaaaggcgctcaaggacgctttt
gtggaaattgtaaacaaaaatgtaggaagtttcacaaatgctgagcttatgtccacgttc
tgtgatcgaattctcaagagtggcggtgaaaagctttccgaagccgaagtggaagaatcc
ctggaccgcattgtgcaacttttttcctacctgacagataaagatttattcgcagaaatt
tatcgaaatcaactttccaagcgtcttttgaaccagcggtctacttcggatgatgccgag
aagctaatgattgccaagctcaaggtccaatgcggtacgcaattcacatctaagatggaa
ggtatgctggccgatttggctgttggtagtcaacaacgcacagagttcgaacagcgaatg
cgacaagtcgaaacctcgctggatttcagtgtgcaggtattaacgacaggtttctggcca
acgtataaatcaccgcaggttactttgacggaagaaatgaacaagtgcatgaaagtcttt
cgcgaatggcacgaattaaaacaccaaaagcgcaagctgggttgggtattgacgcagggc
agtgcaacggttcgcggtacgtttggaaagaagtcgtacgaaattcaagtgtcgacactc
caagcgattgctttggacgctcttagcggtggtgaaacacttagttttgaggatttgtca
cagcgtctaaatttggaagagacgatcctgaagcctttgatgcactctttgtcgtgcggt
aaatacaaagtaattgcaaaaacgccggcgagcaacaagattaatacgacagacaagttt
acggcaaatgccaagttctcatcgaatatgcgcaagatccgcattccaatggcctctctc
gacgctaatttcaatacgaagaaagtggaggaggatcgttccattgccatagaagccgca
attgttcgaatcatgaaggcgcgaaaaactttgcaacatcaacagctgctttccgaagtc
ctggctcagctttcctttttcaatcccaatccgcgggttgtaaagaagcggattgaggct
ttaatagaccgagagtacttggaacgcggtacggacaaccctggagtgtacaactacttg
gcctaa

DBGET integrated database retrieval system