KEGG   Phaeodactylum tricornutum: PHATRDRAFT_30113
Entry
PHATRDRAFT_30113  CDS       T01075                                 
Symbol
pDLDH1
Name
(RefSeq) lipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pti  Phaeodactylum tricornutum
Pathway
pti00010  Glycolysis / Gluconeogenesis
pti00020  Citrate cycle (TCA cycle)
pti00260  Glycine, serine and threonine metabolism
pti00280  Valine, leucine and isoleucine degradation
pti00310  Lysine degradation
pti00380  Tryptophan metabolism
pti00620  Pyruvate metabolism
pti00630  Glyoxylate and dicarboxylate metabolism
pti00640  Propanoate metabolism
pti00670  One carbon pool by folate
pti00785  Lipoic acid metabolism
pti01100  Metabolic pathways
pti01110  Biosynthesis of secondary metabolites
pti01200  Carbon metabolism
pti01210  2-Oxocarboxylic acid metabolism
pti01240  Biosynthesis of cofactors
Module
pti_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pti_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pti00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PHATRDRAFT_30113 (pDLDH1)
   00020 Citrate cycle (TCA cycle)
    PHATRDRAFT_30113 (pDLDH1)
   00620 Pyruvate metabolism
    PHATRDRAFT_30113 (pDLDH1)
   00630 Glyoxylate and dicarboxylate metabolism
    PHATRDRAFT_30113 (pDLDH1)
   00640 Propanoate metabolism
    PHATRDRAFT_30113 (pDLDH1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PHATRDRAFT_30113 (pDLDH1)
   00280 Valine, leucine and isoleucine degradation
    PHATRDRAFT_30113 (pDLDH1)
   00310 Lysine degradation
    PHATRDRAFT_30113 (pDLDH1)
   00380 Tryptophan metabolism
    PHATRDRAFT_30113 (pDLDH1)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PHATRDRAFT_30113 (pDLDH1)
   00670 One carbon pool by folate
    PHATRDRAFT_30113 (pDLDH1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pti04147]
    PHATRDRAFT_30113 (pDLDH1)
Enzymes [BR:pti01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PHATRDRAFT_30113 (pDLDH1)
Exosome [BR:pti04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PHATRDRAFT_30113 (pDLDH1)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA FAD_binding_2 3HCDH_N Lys_Orn_oxgnase FAD_oxidored UDPG_MGDP_dh_N
Other DBs
NCBI-GeneID: 7195322
NCBI-ProteinID: XP_002183630
JGI: 30113
UniProt: B7G9G3
LinkDB
Position
20:551721..553830
AA seq 543 aa
MKFGVSATLVAAVSLPTTTLAFAPLLLSTSSSSSAIASSRAHYSRIASTSLSLSTPADDS
AFDFDVAIIGCGVGGHGAALHARAQSLRTAVFAGNDVGGTCVNRGCVPSKALLAASGRVR
EMRDSAHLESLGIQVDADAVQYSREGIAAHAKNLANRVKGNLEASLVGLGVSVVEGRGVL
TGKPHQVKDETTGKVYTAKDIILAPGSIPFVPPGVTVDEKTVYTSDGALELPFVPEWVAI
VGSGYIGLEFSDVYTALGSEVTFIEALDNLMPTFDREIAKQAERLLIRDRPIDYRTGVFA
SEVTPGIPGEKPVTIKMIDAKTKEHVETLEVDACMVATGRVPNTANMGLEEIGVATQRGF
VAVNEKMQVLTSHEDGQVVPNVWCIGDANGKMMLAHAASAQGISAVENICGRAHAVNHDA
VPAACFTHPEISMVGPTEEQCVEKAAKEGWTLGKSQGSFRANSKALAEGEGNGMAKVLFN
KETGKVVAVHIIGLHAADLIQECANAVAAGTTVQELSMMVHTHPTLSEVMDEAFKGAVGM
SSH
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgaagtttggggtgtcggccactctcgttgcggcagtctcgttgccgacgacgacgttg
gcctttgcgccattgttgctgtcgacgtcgtcctcctcctccgccatcgcctcatctcgg
gcacactattcccgcattgcctccacgtctctctccctgtccacaccggccgacgactcg
gcgtttgactttgacgtggccattattgggtgcggcgtcggcggccacggtgccgcttta
cacgcccgggcgcagagcttgcggacggccgtctttgccggcaacgacgtgggaggcacc
tgcgtcaatcgtggttgcgtccccagcaaggcactcttggcagcgtctggaagagtccgg
gaaatgcgtgattcggcgcatctggaatcactcggcatccaagtagacgccgacgccgtc
cagtacagtcgcgaaggaatcgccgcgcacgccaagaatctggccaaccgtgtcaaggga
aatctggaagcttcactcgttggtttgggagttagtgtggtggaaggacgaggtgtgctt
accggaaaaccgcaccaagtcaaggacgaaacgaccggaaaggtttatactgccaaggac
atcattttggcacccggctccattccctttgtccctccgggtgtcacggtggacgaaaaa
accgtctacacttccgacggtgctctcgaactaccctttgtcccggaatgggtcgccatt
gttggatccggctacattggtctcgaattcagtgacgtgtacaccgcgctaggcagtgaa
gtcacctttatcgaggccctcgacaatctgatgcccacctttgatcgcgaaattgccaaa
caagccgaacgattgctcatccgagaccgaccgattgattaccgtaccggtgtctttgct
tccgaagtcactcccggaattcctggagaaaaacccgttaccatcaagatgattgacgcc
aagaccaaagaacacgtggaaaccttggaagtggatgcttgcatggtcgccacgggccgt
gtcccgaacacggccaacatgggtttggaagaaatcggcgtggcgacgcaacgcggtttc
gtagcggtcaacgaaaaaatgcaggtcctcaccagccacgaagacggtcaagtagtaccc
aacgtgtggtgcattggtgacgccaacggcaaaatgatgctcgcacacgccgccagtgcc
caaggcattagtgcggtggagaacatttgtggccgcgctcacgccgtcaatcacgatgcc
gtcccggcggcctgctttacgcatcccgaaatttccatggtcggtcctaccgaagaacag
tgtgtggaaaaggctgccaaagaaggttggaccctaggcaaatcccagggaagcttccgg
gccaactccaaggccctcgcggaaggcgaaggcaacgggatggccaaggtcttgttcaac
aaggagacgggcaaagttgtggcggtgcatatcattggtttgcacgcggccgatttgatt
caggaatgtgccaatgccgtcgcggccggaaccaccgtgcaggaattgtccatgatggtc
catacgcacccgaccttgagtgaagtcatggacgaagcctttaaaggggccgtcggcatg
tcgagtcactaa

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