Phaeodactylum tricornutum: PHATRDRAFT_30436
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Entry
PHATRDRAFT_30436 CDS
T01075
Symbol
COPdelta
Name
(RefSeq) hypothetical protein
KO
K20471
coatomer subunit delta
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_30436 (COPdelta)
Membrane trafficking [BR:
pti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
PHATRDRAFT_30436 (COPdelta)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adap_comp_sub
Clat_adaptor_s
TPX2
Motif
Other DBs
NCBI-GeneID:
7195866
NCBI-ProteinID:
XP_002184276
JGI:
30436
UniProt:
B7GAY9
LinkDB
All DBs
Position
22:complement(565580..567550)
Genome browser
AA seq
512 aa
AA seq
DB search
MVVLSASVCTRQGKALVSRQFVEMNRLRVEGLLAAFPKLVGHTSQNHTYVETDSVRYVYQ
PLENQMYLLMITTKTSNIVQDLGTLRLLAKVVPDICGGLQEHAIHENAFDLIFAFDEVLT
SGGYKEDASLSSIRTNLLMDSHEEKIHLALKQSKEDQAKAEMQRQAKTIKERQMAQLRNN
MMQGGTGQSQPGYSPYHTPAPAIPEPPKVLAKSGMKLGGGAAGGGLGLGGNGMKKDVMAA
MAAEDNLFGGTGAAGGNAFGLSSAPPKQTATPSTPLTLVMEEKVTVQMNREGAVESAEVK
GTLTLTANTDAGALALVNVNKAQLPAQFSYATHPKVDKKAYETSGTLTLKGGKGFPLSRG
VGILRWSYAGDDVAPLSINCWPEDEGGSINVNIEMELTRKDLVLQDVNILLPLGTTDAPV
VESIDGVFKHDSRAGMMCWHFDQVDANTNATASMEFSIPGSDPDAFFPVQVGFRSETLLC
PMEITSVTNSQSGAAIPHSMTKSFAPEAYTCA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcctttctgcctccgtctgcacgagacagggcaaagcgcttgtttcgcgtcag
ttcgtggaaatgaaccgcttgcgagtggaaggcttactagccgcctttcccaagctcgta
ggtcacacttcgcagaatcatacctacgtcgaaacagactccgtgcgttatgtgtatcag
ccactcgagaatcaaatgtatctgttaatgatcaccacaaagacttccaacattgtgcag
gatctagggaccttgcgtttgctcgccaaggtcgttcccgacatttgcggaggactccag
gaacacgcgatccacgagaacgcttttgatttgatctttgcctttgacgaagtcctgacg
tcgggaggatacaaggaagacgcctcgctgtcctccattcgaaccaatctactcatggac
agtcacgaagaaaagatacatctcgcgctcaagcaatccaaagaagaccaagccaaggca
gagatgcagcgccaagccaagactatcaaagagcgtcaaatggcgcagttgcgcaacaac
atgatgcaaggtggtactgggcaatctcaaccgggttattctccctatcatactcccgcc
ccagccattccggaaccacccaaggttctggcaaaatcgggtatgaagctgggaggtggt
gcagcgggaggcggtctcggacttggcggcaatggaatgaagaaagatgtcatggccgcc
atggctgcggaagacaacctgtttggcggtacgggtgctgccggcggtaatgcgtttggt
ttaagttcggcaccaccaaaacagacagcaaccccctccactcctcttacacttgtcatg
gaggaaaaggttaccgtgcaaatgaatcgcgaaggcgccgtagaatccgctgaagtcaaa
ggaacgcttacgttgaccgccaatactgatgctggcgccctagctctagtcaacgtaaac
aaagcacaactaccagcccagttttcctatgccacgcatccaaaggtggacaaaaaagct
tacgaaacgtcaggaacgttgacactcaagggaggcaaaggatttccactcagccgtgga
gttggcattctacgttggtcctatgctggcgatgatgtggcacctttgtccattaactgc
tggccggaagatgaaggtggctcgatcaatgtcaacattgaaatggaattaactcgaaag
gaccttgtgttgcaggatgtaaacatactgctgccgctggggacaacggatgcaccggtc
gtcgagtcgattgacggtgtctttaagcatgactctcgcgcgggcatgatgtgctggcat
tttgatcaagtagacgccaacaccaacgcgacagcgtctatggaatttagcatccctggc
tctgatcccgatgctttctttcccgtccaagttggctttcgttccgaaacgttgctgtgc
cctatggaaattacttccgtgacaaactctcagtccggcgccgccattccgcacagtatg
acgaagtcgtttgcgccagaagcttatacatgtgcttaa
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