Phaeodactylum tricornutum: PHATRDRAFT_31489
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Entry
PHATRDRAFT_31489 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K08490
syntaxin 5
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
PHATRDRAFT_31489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_31489
Membrane trafficking [BR:
pti04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
PHATRDRAFT_31489
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin
SF-assemblin
MobL
ATG17_like
NagJ_C
EntA_Immun
Syntaxin-5_N
V-SNARE
CHDCT2
ATG16
YwqH-like
Filament
COG6_N
Motif
Other DBs
NCBI-GeneID:
7196051
NCBI-ProteinID:
XP_002176543
JGI:
31489
UniProt:
B7FRG9
LinkDB
All DBs
Position
1:200256..201466
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AA seq
391 aa
AA seq
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MASDRTNEFLSLAQSLPSAAESSIAPLLGSSHTPSTSSFVAARSAPPTPAYAALREFHQT
AGDISRDIASTSALLAELTTLVRHQSMLQDDSAPVNNLVVRIKTSIENLHSRLDQASKVL
QTQKRQLGKHSQAGQEATNLVDGLQAEFAQAATGFKRVLQQRTDNLKETDDRQRQVYGNG
DHDGFHDDPMPDMGLLAAPPPVYGDASNPHASFMLDLTSNLQQQTGGEPTSSSLPRPHGI
AAPGSGGLEYGVRQRKLGNAGTPDAANFYGHTGPLTPLDIQRMEEESGLTQSLQLIPDQD
YMQQRADAMSTVETNIVELGTIFNKLAVMVSEHQEMVQRVEDNVEDANTNISLSLETLTD
TLTNLRSNRQLMLRLFSVLVVFIIVFVIGFA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggatcgaacgaacgaatttctttcactcgcccagagtttgccgagtgcggcc
gaatcctccatagcgcccctgctcggatcgtcccacacgccctctacatcgtccttcgtc
gctgcacgatccgcgccaccgactcccgcgtacgctgccttgcgcgaattccaccaaaca
gccggcgatatcagtcgtgacattgcttcgacgtcggcccttctcgccgaactcacaacg
ctggtccgtcaccagtccatgctccaagacgacagtgctcccgtcaacaatctcgtcgtc
cgcatcaagaccagtattgagaatttacacagtcgtttggatcaggcctccaaggttttg
caaacgcagaaacggcagttgggcaaacacagtcaagccggacaagaagccaccaatctc
gtcgatggactccaggcggaattcgcacaggccgctacaggctttaaacgagtcctacag
cagcggacggacaatctcaaagaaaccgacgaccgccaacgacaagtctacggaaatggc
gatcatgatggtttccacgacgatcccatgcccgacatgggcctcttggccgccccaccg
cccgtctacggcgacgcatccaatcctcacgcatcctttatgctagatttgaccagcaat
ttgcaacaacagacgggcggtgaacccacgtccagtagtctcccccgtccgcacggcatt
gccgctcccggatcgggcggtctcgagtacggagtccggcaacgcaaactcggtaacgcg
ggcaccccggacgccgccaatttctatggccacaccggacccttgacccccctcgatatt
caacgcatggaggaagaatccgggttgacccagtcactccaactcattcctgatcaggat
tacatgcaacaacgtgccgacgccatgtccacggtcgaaaccaacattgtggagctgggc
accatttttaataaactggccgtcatggtatccgaacatcaagaaatggtacagcgcgtg
gaagacaacgtcgaagacgccaacaccaacattagtttgtcgctggaaacgttgacggac
accttgaccaatctgcgcagcaatcgacaactcatgctacggctcttctccgtcctggtg
gttttcattattgtttttgtaatcggctttgcgtaa
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