KEGG   Phaeodactylum tricornutum: PHATRDRAFT_31489
Entry
PHATRDRAFT_31489  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K08490  syntaxin 5
Organism
pti  Phaeodactylum tricornutum
Pathway
pti04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    PHATRDRAFT_31489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pti04131]
    PHATRDRAFT_31489
Membrane trafficking [BR:pti04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    PHATRDRAFT_31489
SSDB
Motif
Pfam: SNARE Syntaxin SF-assemblin MobL ATG17_like NagJ_C EntA_Immun Syntaxin-5_N V-SNARE CHDCT2 ATG16 YwqH-like Filament COG6_N
Other DBs
NCBI-GeneID: 7196051
NCBI-ProteinID: XP_002176543
JGI: 31489
UniProt: B7FRG9
LinkDB
Position
1:200256..201466
AA seq 391 aa
MASDRTNEFLSLAQSLPSAAESSIAPLLGSSHTPSTSSFVAARSAPPTPAYAALREFHQT
AGDISRDIASTSALLAELTTLVRHQSMLQDDSAPVNNLVVRIKTSIENLHSRLDQASKVL
QTQKRQLGKHSQAGQEATNLVDGLQAEFAQAATGFKRVLQQRTDNLKETDDRQRQVYGNG
DHDGFHDDPMPDMGLLAAPPPVYGDASNPHASFMLDLTSNLQQQTGGEPTSSSLPRPHGI
AAPGSGGLEYGVRQRKLGNAGTPDAANFYGHTGPLTPLDIQRMEEESGLTQSLQLIPDQD
YMQQRADAMSTVETNIVELGTIFNKLAVMVSEHQEMVQRVEDNVEDANTNISLSLETLTD
TLTNLRSNRQLMLRLFSVLVVFIIVFVIGFA
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcttcggatcgaacgaacgaatttctttcactcgcccagagtttgccgagtgcggcc
gaatcctccatagcgcccctgctcggatcgtcccacacgccctctacatcgtccttcgtc
gctgcacgatccgcgccaccgactcccgcgtacgctgccttgcgcgaattccaccaaaca
gccggcgatatcagtcgtgacattgcttcgacgtcggcccttctcgccgaactcacaacg
ctggtccgtcaccagtccatgctccaagacgacagtgctcccgtcaacaatctcgtcgtc
cgcatcaagaccagtattgagaatttacacagtcgtttggatcaggcctccaaggttttg
caaacgcagaaacggcagttgggcaaacacagtcaagccggacaagaagccaccaatctc
gtcgatggactccaggcggaattcgcacaggccgctacaggctttaaacgagtcctacag
cagcggacggacaatctcaaagaaaccgacgaccgccaacgacaagtctacggaaatggc
gatcatgatggtttccacgacgatcccatgcccgacatgggcctcttggccgccccaccg
cccgtctacggcgacgcatccaatcctcacgcatcctttatgctagatttgaccagcaat
ttgcaacaacagacgggcggtgaacccacgtccagtagtctcccccgtccgcacggcatt
gccgctcccggatcgggcggtctcgagtacggagtccggcaacgcaaactcggtaacgcg
ggcaccccggacgccgccaatttctatggccacaccggacccttgacccccctcgatatt
caacgcatggaggaagaatccgggttgacccagtcactccaactcattcctgatcaggat
tacatgcaacaacgtgccgacgccatgtccacggtcgaaaccaacattgtggagctgggc
accatttttaataaactggccgtcatggtatccgaacatcaagaaatggtacagcgcgtg
gaagacaacgtcgaagacgccaacaccaacattagtttgtcgctggaaacgttgacggac
accttgaccaatctgcgcagcaatcgacaactcatgctacggctcttctccgtcctggtg
gttttcattattgtttttgtaatcggctttgcgtaa

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