Phaeodactylum tricornutum: PHATRDRAFT_31725
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Entry
PHATRDRAFT_31725 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11883
RNA-binding protein NOB1
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHATRDRAFT_31725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_31725
03051 Proteasome [BR:
pti03051
]
PHATRDRAFT_31725
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PHATRDRAFT_31725
Proteasome [BR:
pti03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
PHATRDRAFT_31725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
DUF7879
BRF1
Motif
Other DBs
NCBI-GeneID:
7196022
NCBI-ProteinID:
XP_002176653
JGI:
31725
UniProt:
B7FP62
LinkDB
All DBs
Position
1:<777708..>779691
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AA seq
629 aa
AA seq
DB search
MVPSSTKADNNDVSTTAISTHVSVAVEQKGEAKYRALVIDSGPIIRLAGLTTLWRRADSF
YTVPAVLQEIRDAKARQHLNTLPFELKTREPSAEAIQAVVEFSRQTGDYPSLSSVDLQVL
ALLYDLEKEGCADMSHVGKTPKRTVGVGKIQILANDAEGSITAARLEPQVDHCGMDDYSQ
QEAKDQSIHDDGESTVDEYDDESVTSEDLELENVSQTNDLVVPASAKPPKTWAALVNPIA
ASKELPKNDSIAKPVFDQALHIPFGRMSLRSVAANNNKEENGQFSDADSDRGFSSEDEES
DDDFDSNQEISDEECDVYILDPEEVERKNKTFDTTVQDEHLSDFPSLAASIRVPYEEAND
DERDAQRQIVEDRRKQKSLQPVSNSGKLYNSFRKYTNLMKPKAAIKKNTPKVTSTVSTPG
EKYDELRTQSTIDNTQSRIIGGTAFAGQDADFVDDGEGWITSTKEIKTLRAAGSLDPMKN
LGKSGELVTTAMGPSVGQRAACTTTDFAMQNVILQMNLELLSVDGIKVRKLKSWVTRCGA
CYKVYTSHESSGPLGKRLFCERCGSDMIQRIAASVDGKTGRLRLHLSKRYRHNLRGTKYS
LPKSGSGNRFQGDLLLREDQLLMGAWNQK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggttccttctagcacgaaggcagacaataacgatgtttcgactacggcaatatctacg
catgtatccgtagcggtggaacaaaaaggggaagcaaagtaccgtgctttagtgattgat
tccggtccgatcattcgtctcgctggcctgacgactctgtggcgtcgggcggattctttc
tatacggtgccggccgtactgcaagaaatccgagacgccaaagctcgtcagcacttgaat
actctgccgttcgagctgaaaacacgtgaaccgagcgcggaagcaatccaggccgtcgtg
gagttttctcgtcagacgggcgattatcccagcttatcgtcggtggatttgcaagtgctc
gcgctgttgtacgacctcgaaaaggaaggatgtgcagatatgagtcacgtggggaaaact
cccaagcggacggtaggagttggaaagattcaaatattggcaaacgatgccgaaggtagc
attacggcagcccgcctcgagccgcaggttgatcattgtggaatggacgactactcgcag
caggaagccaaagaccaatccatacacgacgatggagaaagtacggtggacgagtatgat
gatgaaagtgtgacatctgaagacttagaactggaaaatgtgtcacaaacaaatgatctg
gtagtgcctgcgagcgcaaagccccccaaaacgtgggcggcccttgtcaatccaattgcc
gcgtcgaaggaattaccaaagaatgacagtattgccaaacccgtctttgatcaggctcta
cacatcccttttggtcggatgagcctacgctcggtggccgcaaataacaacaaggaggag
aatggacagtttagcgatgcagatagcgaccgtggcttttcgtcggaggacgaggaaagc
gacgatgactttgactccaatcaggaaattagtgacgaggaatgcgatgtatatatattg
gatccggaggaagtggagcgaaagaataagacgttcgatactacagtgcaagacgagcac
ttgtcagactttccaagtctcgctgcctcaatccgtgttccatacgaagaagcaaatgat
gatgaaagagatgcacaaaggcaaattgtggaagaccgacggaagcaaaagtcactacag
cccgtttcaaattccgggaagctttacaactcatttcgaaaatatacgaatttgatgaaa
cccaaggctgccatcaagaagaataccccaaaggtgacatcaacagtgtcaacacccggc
gagaagtacgacgaacttcgtactcaatccacaatcgataatacccagtcacgaattatt
ggcggcacggcgtttgctggccaggacgccgattttgtcgacgacggagaaggctggatc
acttctacaaaggaaataaaaaccttacgtgcagctgggagtttggatccaatgaagaac
ttaggcaagagtggtgagctggtaactactgccatggggccatcggtcggacaacgcgcg
gcttgtaccacaactgactttgctatgcaaaatgtaattttgcaaatgaatttggagctt
ttatctgtggacggtatcaaagttcggaaattgaagtcatgggtgactcgctgtggagcc
tgctacaaagtctacactagtcatgagagttctggtccactgggaaagcgactgttttgt
gagcgatgcggcagtgatatgatccaacggattgctgccagtgtcgatggcaaaacagga
cgcctgcggctccacttgtcgaagcggtatcgtcacaacttacgcggaaccaagtattcg
ttgccgaaatcggggtcaggcaaccggttccagggagatcttttgcttcgtgaagatcaa
cttttgatgggagcatggaaccaaaagtaa
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