Phaeodactylum tricornutum: PHATRDRAFT_32726
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Entry
PHATRDRAFT_32726 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHATRDRAFT_32726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_32726
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_32726
03029 Mitochondrial biogenesis [BR:
pti03029
]
PHATRDRAFT_32726
Enzymes [BR:
pti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
PHATRDRAFT_32726
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
PHATRDRAFT_32726
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
PHATRDRAFT_32726
Mitochondrial biogenesis [BR:
pti03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
PHATRDRAFT_32726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
7197551
NCBI-ProteinID:
XP_002177658
JGI:
32726
UniProt:
B7FSG3
LinkDB
All DBs
Position
2:661059..662093
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AA seq
344 aa
AA seq
DB search
MAGQKRARSQKQSQSSKSARKKVLNANDPRPVLDLWVPLPKDADSLPQTVMVWRLLDRLE
STGFSHAALTHTVYGRPTPNTDDAESALPDSLWKDRPVTKGIKKANIKVLRRLHVVVENL
VDLGRYNGPAIDGYDLVSISPRNDAAFSAACSSALAAQIITLDYTAGRGGNQLPFKIGAV
DVRAAIERKAVFEIPYAPAILNRNQRKAIIQTCRELQVASLGVTPQVLVSSGPRTERNFD
AGPMALRMPSDVVNLLRTVMHFDEQVSSQALTMGPNFALEQSKRYRFGKSLITDIHTEAS
YTDEDEKHLEILDQGNRKTKGTSSKIAEPDGDGDVVIEDGFIAL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccagaaaagagcacgatcgcagaaacaatcgcagtcttctaaaagtgcaaga
aagaaagtgctcaacgccaacgatcctaggccggttcttgacttgtgggtaccgctgccg
aaagatgccgattccctaccgcaaacggtaatggtttggagacttctggatcgattggag
tcgactgggtttagtcacgctgccttgacccatacggtttacggtcgccctacaccaaat
acggatgatgccgagagcgcgcttcccgattctctttggaaagaccgaccagtgaccaaa
ggaatcaaaaaagctaatatcaaggtgttgcgaaggctgcacgtagttgttgaaaatttg
gtcgatctgggacgatacaatgggcccgccatcgatggatacgatcttgtttctatttca
ccgcgcaatgacgcagctttttccgcagcgtgttcatctgcattggctgcgcagatcatc
actctagactacacagctggtcgaggcggtaatcagcttcctttcaaaattggagcggtg
gatgtcagggcggccattgagcgcaaagctgtgtttgaaattccgtacgcaccagcaatt
ctgaatcgcaaccaaagaaaggccattattcagacttgccgagagctacaagtcgccagt
ttgggagtcaccccacaagttctagtgtcatcaggaccgcgaaccgaacggaatttcgat
gcgggtcccatggctctacgaatgcccagtgatgtagtgaatttgttgcgcacagtcatg
cattttgatgagcaagtttcatcccaggcgctgacgatgggcccaaattttgctttggag
caatcgaagcggtatcgattcggaaagtctttgatcacggacatacacactgaagcctca
tatactgatgaagatgaaaaacaccttgaaatattggatcaagggaacagaaaaacgaaa
ggaacgagtagcaaaattgctgagcccgacggggatggagacgtggtcattgaggacgga
tttattgcattgtaa
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