Phaeodactylum tricornutum: PHATRDRAFT_32758
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Entry
PHATRDRAFT_32758 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_32758
Enzymes [BR:
pti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHATRDRAFT_32758
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
90S particles
Helicases
PHATRDRAFT_32758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
7197568
NCBI-ProteinID:
XP_002177675
JGI:
32758
UniProt:
B7FSJ5
LinkDB
All DBs
Position
2:735083..736618
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AA seq
483 aa
AA seq
DB search
MSFPSWWKNEESSFLGVNKAIQRNIENGRWKEPKPIQMQAIPTLLERRDFIGSAPTGSGK
SGAFIIPSLFLSSAPHHKLKSSREGEIRGLILAPSLELAAQLHREIERLGIGKPGGLSSL
LLSRSNASQVIGGSAGGKSGLDMLVSTPLRLVDAIEKGLRLNSVRIVVLDEADRLLDATD
GKRARKPKGEAGTESIVEDEEEEEEEEDDSSQSFLAQMDIVLSEVPSTATRALFSATVTP
TVRFLAESILRNPLDVTIANSGSVGGANTDIEQELMFVGKEQGKLLAIRQLVQRGQLHPP
AIIFLESKNRAQALFGELLYDGIHVDVIHAGRSKSARENAVAKFRRGDTWVLICTDLVAR
GVDFRAVNMVINYDLPSSGIDYVHRIGRTGRAGRKGKAITFFTEGDFENLRTIANIIKQS
GCNVEDWMLNLPRKSNKKNANSVVRRRERISTTPEYDRQKKRRRQQAIEHNKKKLKMSTT
SQE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttccttcttggtggaaaaacgaggaatccagctttttaggcgttaataaggct
attcagcgcaatattgaaaacgggcgctggaaagagccgaagcctatacagatgcaagct
attcctactttgctggagcggcgtgatttcattggatcggcgccgaccggttcgggaaag
tcgggtgcctttatcattccgtccctctttctaagcagcgctccgcatcacaaattgaag
tcatctcgagaaggtgagattcgggggttgatcttggccccgtccttggaattggcagct
caattgcatcgcgaaatcgagcgccttggtattggcaaacccggtggattgtcgtctctt
ctactgtctaggtcaaacgcgtcccaagttattggaggtagtgccgggggaaagagtgga
ctcgatatgctcgtctctactccattgcggctcgtcgatgcgatagaaaagggcttgcgg
ctaaattcagtacgaatagtggtacttgacgaagcggatcgtctcctcgacgctactgat
gggaaaagagcccgaaagccaaagggggaggcaggaacggagtcgattgtagaagacgaa
gaggaggaggaagaagaagaagatgacagtagtcaatcttttcttgcacaaatggacatt
gtactgagtgaagtgccatcaacggcaacgcgtgctctattctcggctaccgtcacgccg
actgtacgcttcttggctgaatctattctgcgaaaccctttagacgtcacaattgccaac
tcaggctccgttggtggtgcaaatacagatatcgagcaagagttaatgtttgttggaaag
gaacagggcaaactccttgctatacggcaactggtccagcgaggacagctccatcctcct
gccataatatttttggagagtaaaaatcgagcgcaagcgctatttggagaacttttgtat
gatggtattcatgtggacgttatccatgcgggtcgctccaaatctgccagggaaaatgcg
gttgccaagtttcgtcgaggtgatacttgggttttgatctgtaccgatctcgtcgctcgt
ggtgtggacttcagagccgtgaatatggtcatcaattatgatttaccctcatcaggtatc
gactatgtacatcgtattggtcgaacagggcgcgccggtcgcaaaggaaaagccattacc
ttctttacagagggggactttgagaacttgcgaactattgccaatattatcaagcagagc
ggctgtaacgtagaggactggatgctgaatctaccaagaaagagcaacaaaaagaacgcg
aattccgtggttcgacgacgggaacgaatcagcacgacacccgagtatgaccgccaaaaa
aaacgccgacgacaacaggccatagaacacaacaaaaagaagttgaaaatgtcaactact
tcgcaagaatag
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