Phaeodactylum tricornutum: PHATRDRAFT_34592
Help
Entry
PHATRDRAFT_34592 CDS
T01075
Symbol
CPF2
Name
(RefSeq) cry-dash from the cryptochrome/photolyase family
KO
K25656
cryptochrome
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99998 Others
PHATRDRAFT_34592 (CPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
7199524
NCBI-ProteinID:
XP_002178889
JGI:
34592
UniProt:
B7FV99
LinkDB
All DBs
Position
5:983416..985541
Genome browser
AA seq
610 aa
AA seq
DB search
MSSSRSKQSFWFLIFVHTVLILTFAAGAATAMRGASVSTVTKATSRASSQVVLHWFRHGD
LRLLDNPALIHSSKTAESCVPVFCFDDSVYGNDNRTPDTRAPHSNDRGQLKCGPRRAQFV
LDSVQDLRRSLQSRGSALYVAHGKPAQVFQRLVDAWPAVPAADTAAPNGSLLTIVCQREV
VREENDAVRAVQSVLRRRFPQAKVQQIWGSTMYELDDLPFATDLANMPDTFTPFRNKVEK
NCQIGTPLPVPKQLSLPENFPSALKQGLEYLPTLKELGYTDAQIQQVETHDERGVLHFMV
AKQPDSHDCLKDYFETRNGMLGPNYSTKFSPWLAHGNVSPRYVAAQCRKYEEERVENKST
YWVVFELLWRDFCKFFATKHGDAIFYPYGTTERTDRHKPWSTFGRNLQAWQEGRTGYPLV
DANMRELVATGFMSNRGRQNVASFLAINLNHDWRCGGDFFESHLLDYDVYSNWVNWCAAA
GMTGGRLNRFNISKQSKDYDQHGDYVRHWLPELAKVPNEFVHEPWKMTSFQQMEYECKLG
VDYPNPIVPPSRPNPHTDRNNRGRGGHQSKGNNRHGPPDKSRKANASGSNRHQKYEMKSL
QPGSFRVKES
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtagcaggtccaagcagtctttttggttccttatctttgttcacaccgtcctt
atcttgacctttgctgccggtgccgccactgccatgagaggagcatccgtcagtaccgtg
acgaaagcgacctcacgcgcctcgtcgcaagttgtcttgcactggttccgacacggagat
ttacgcttgctggacaatccggccttgatccattccagcaaaactgccgaatcttgtgtt
cccgtcttttgtttcgacgacagtgtctacggcaacgacaatcggactccggacactcgc
gcgccgcattcgaacgatcgcggtcaactcaagtgcggaccccgtcgtgcgcagttcgta
ctggattcggtccaggatctacgacgcagtctacaatcccgaggtagcgccttgtacgtg
gcgcacgggaaacccgcacaagtcttccaaagattggtggatgcctggccggcggttcca
gccgccgacactgccgctccgaacggcagtctactcaccattgtttgtcagcgggaagtg
gtgcgggaggaaaacgacgcggtccgagcggtacaatccgttctacgccgacgctttccg
caagccaaagttcaacaaatttggggctccaccatgtacgaactggacgatttgcccttt
gccacggacctcgccaacatgcccgatacctttacgccctttcggaacaaggtggaaaag
aattgtcaaattggcacacccctgccggtacccaagcaactctctctgccggagaatttt
ccttccgccttgaaacaaggcctggagtacctacccaccttaaaagagctggggtacacg
gatgcgcaaattcagcaagtcgaaacccatgacgagcgcggagtcctgcactttatggtg
gcgaaacagccggactcgcacgattgtttgaaggattacttcgaaacgcgcaacgggatg
ctggggccgaactattcgaccaaattcagtccctggttggcccacggcaacgtttcaccc
cggtacgtggccgcacagtgccgtaagtacgaagaagaacgcgtggagaacaaatctacc
tactgggtagtctttgaactgctgtggcgcgatttttgcaaattttttgccacgaaacat
ggtgacgctattttttatccgtacgggacgaccgaacgcacggatcggcacaagccttgg
tcgacctttggtcgtaatttacaggcgtggcaggagggtcgcacgggctaccctctcgta
gacgccaacatgcgagaattggtcgccaccggcttcatgtcaaatcgtggccgtcagaat
gtggcatcctttctcgccattaacttgaatcacgattggcgatgcggcggggatttcttc
gaaagccatctgttggattacgacgtgtatagcaattgggtgaattggtgtgcggccgcg
ggtatgacgggtggtcgtctcaaccgattcaacatttctaagcaaagcaaggactacgac
caacacggcgactacgtgcggcattggttaccggaactggccaaggtgcccaacgaattc
gtccatgagccttggaaaatgacgtcgttccagcagatggagtacgagtgcaaactcggc
gtggattatcccaacccgattgttccgccgtcccggcccaacccccacacggaccggaac
aatcgcggccgtggtgggcaccagtcaaaaggcaacaatcgccacggtccacccgacaaa
tcccgcaaagccaatgcgagtggaagcaaccgacaccaaaaatacgaaatgaagagtctc
caacccggcagttttcgagtcaaggaatcgtaa
DBGET
integrated database retrieval system
