Phaeodactylum tricornutum: PHATRDRAFT_36142
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Entry
PHATRDRAFT_36142 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
PHATRDRAFT_36142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_36142
Membrane trafficking [BR:
pti04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
PHATRDRAFT_36142
mTORC2 complex
PHATRDRAFT_36142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Nucleoporin_N
Cytochrom_D1
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_IP5PC_F
VPS8_N
DpaA_N
Motif
Other DBs
NCBI-GeneID:
7201188
NCBI-ProteinID:
XP_002180481
JGI:
36142
UniProt:
B7G0I1
LinkDB
All DBs
Position
9:<659200..>660204
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AA seq
320 aa
AA seq
DB search
MSVVFATAGYDHIIRFWEAPSGICSRIIKYPDSQVNRLEITPDKQFIAAAGNPVIRLYEI
LEPSAMGGDERDQQAVLTLEGHGSNVTSIGFHKDGRYLYSGSEDGTIKVWDLRSPSYSRS
FDVGAGVNSVTLRTDRDQFVSGDQNGYVKIWDLGGNGCINSLKPRSAEGTVPIQAVDISE
DSRTLVAVSNHGSVFVWDPTSSVGSEDDNSTMRPVKKFRAHPPGTYCLHGKIAPDCRHLV
TTSSDGTAKLWDTATWELTHTLQNQKWVWDAAFCADSSYLVTASSDHVARLWNLQKGSVV
RQYHGHQSSVTCVALNDSSV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgttttcgcaacagccggttatgatcacattattcgattctgggaagcacct
tctggtatttgttcgcgaatcataaagtatccggactcgcaggtcaatcgattggagatc
acacccgacaagcaatttattgctgctgctgggaatccagttattcgcttgtacgaaatt
cttgagccctctgcgatgggcggtgacgaaagggaccagcaagctgttttaactctggaa
ggccacgggtcgaatgttacatccattgggtttcacaaagatgggcgttatttatactct
ggttccgaagacggaacgatcaaagtgtgggacttgcgtagtcctagctatagtcgcagc
tttgatgttggagccggcgtcaattccgtaactctaaggacggatcgagaccagttcgta
tctggcgaccagaatggatatgtgaagatttgggatctgggggggaatggttgcatcaat
agtctcaagccgcgatcggccgaaggaacagttcctatccaagcagttgacatttcggag
gattctcggacgctcgtggcagtctcgaatcacggcagtgtttttgtatgggacccaact
tcaagcgttggaagtgaagatgacaacagcacgatgcgacccgttaaaaagtttcgagct
catcctcctggcacttactgcttgcacgggaaaatagcacccgattgtcgtcatttggtg
accacatccagtgatggcacggcgaagctgtgggatacagccacttgggaattaacacac
actctgcaaaaccaaaaatgggtatgggatgcagccttttgcgcagactcttcgtattta
gtgacagcaagtagcgaccacgtcgccagactgtggaatttgcaaaagggatcggtcgtc
cggcaatatcacggccaccaatcatccgttacatgcgtcgctctcaacgacagtagtgta
tga
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integrated database retrieval system