Phaeodactylum tricornutum: PHATRDRAFT_37723
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Entry
PHATRDRAFT_37723 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K02328
DNA polymerase delta subunit 2
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03030
DNA replication
pti03410
Base excision repair
pti03420
Nucleotide excision repair
pti03430
Mismatch repair
pti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHATRDRAFT_37723
03410 Base excision repair
PHATRDRAFT_37723
03420 Nucleotide excision repair
PHATRDRAFT_37723
03430 Mismatch repair
PHATRDRAFT_37723
03440 Homologous recombination
PHATRDRAFT_37723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pti03032
]
PHATRDRAFT_37723
03400 DNA repair and recombination proteins [BR:
pti03400
]
PHATRDRAFT_37723
DNA replication proteins [BR:
pti03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
PHATRDRAFT_37723
DNA repair and recombination proteins [BR:
pti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
PHATRDRAFT_37723
MMR (mismatch excision repair)
DNA polymerase delta complex
PHATRDRAFT_37723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
7202599
NCBI-ProteinID:
XP_002181804
JGI:
37723
UniProt:
B7G3K2
LinkDB
All DBs
Position
13:complement(788425..789837)
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AA seq
470 aa
AA seq
DB search
MTVAAIPVQRASSTHLPQWQRFQPERTASEHPTGTHPYQRQYAHVYHQRLAVLGPRVWQA
VLRDNQCENDNHNHSNNNDDAHTVRHVPRILELEEGVLSIAVGTIVKEYENSVTGNDINS
DAVVPGAVNGAKDALVLEDESGRVVLATALVHQYPTGVVLGVQGTVGTDGVLQVERFYHP
WTCAPPALPLYIDHTNNINNNNNDPTYIMLVSGLHCGSPKVSSLPRDMLLSYLQGRFGHK
ARHVARVIFAGGLTSTDATAVQELDGFLLALAASGVPIDVLPGEHDPTTANWPQRSLHRA
LLPHTTTRYGTLVARTPNPYAARHDHVVCLGTDGRNVRDLCTRVGVPVDDHDSPGAWRPV
TELQALERTLAWGHVCPTGPDSVPTVPHALQDPMVIEPHLPHLYFAGNAKKFATQRVVAA
HADTATAVDTDDRVAFTRLVCVPQFSETGQAVLVNLQTLDVEVVRFQDEE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggcggccattcccgtccagcgcgcttccagtacgcatctaccgcagtggcag
cggttccagccggagcgtacggcatcggagcatcccaccggtacgcatccctaccagcga
cagtatgcacacgtctaccaccagcgcttggctgtcctcggaccccgcgtctggcaagcg
gtccttcgagacaaccagtgcgagaacgacaaccacaaccacagtaacaataacgacgat
gcccacacggttcggcacgtcccacggattctcgaactagaagaaggcgtcttatcgatt
gccgttggaaccattgttaaggaatacgaaaacagtgtcaccggtaacgacatcaacagc
gacgctgtcgttccgggcgccgtcaacggtgccaaagacgctctggtcctcgaagacgaa
agtggacgcgtggtgctcgctaccgcactagtacaccagtatccgaccggagtcgtcctg
ggggtccaaggaactgtcggcacggacggagttttgcaagtcgaacgcttctaccatccc
tggacatgtgcaccacccgccttgcctttgtatatcgaccacaccaacaatatcaacaac
aacaacaacgaccctacctatatcatgctcgtttcgggattgcactgcggcagccccaaa
gtctcgtcgctaccccgcgacatgctcctctcctacctacagggtcgtttcggacacaag
gcccgtcacgtcgcccgcgtcattttcgccggtggtctcacctccaccgacgccaccgcc
gtacaggaactcgacggattcctactcgccctcgccgcatcgggtgtccctattgacgtc
ctacccggtgaacacgacccgaccaccgccaattggccccaacggagtctgcaccgggcc
ttgctcccacacaccaccacccgctacggaacactcgtcgcgcgaacccccaacccctac
gccgctcgacacgatcacgtcgtttgcctcggaacggacggacgcaacgtgcgggacttg
tgtacccgcgtgggagttcccgtcgatgaccacgactcgcccggagcgtggcggcccgtg
acggaactccaagcgctcgaacgtaccctcgcctggggacacgtctgtcccaccggtccg
gactcggttcccaccgtcccccacgctctgcaagatcccatggtcattgaaccccactta
ccgcatctctactttgccggtaacgccaaaaagttcgccacccaacgtgttgttgccgcg
cacgcggatactgctactgctgtggacaccgacgatcgtgtcgcgttcacccgactcgtc
tgtgttccccagtttagtgaaaccggacaggcggtactcgtgaatctgcaaaccctggac
gtggaagtcgtgcgttttcaggatgaagaatag
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