Phaeodactylum tricornutum: PHATRDRAFT_37949
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Entry
PHATRDRAFT_37949 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12846
U4/U6.U5 tri-snRNP-associated protein 3
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHATRDRAFT_37949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_37949
Spliceosome [BR:
pti03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
PHATRDRAFT_37949
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNRNP27
DUF7167
Motif
Other DBs
NCBI-GeneID:
7202690
NCBI-ProteinID:
XP_002181919
JGI:
37949
UniProt:
B7G4I0
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All DBs
Position
14:495303..495815
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AA seq
170 aa
AA seq
DB search
MSNSNGGYDIRQETINARYRTNPREQDRRERSRSRSPPSRLNDDEEIVRVRLQAERRARM
ARLRAENDVEEENISSLEGTGDESKKARKKLKSREDSLQVEAEELEGLEEDEQMQLLLGF
GGEFGSTKGNKVEDNHSSSARGAAAKHKARKYRQYMNRKNGFNRPLDKMD
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagcaatggtggatacgacatccgtcaagaaacgataaatgcacggtaccgg
accaacccgcgagaacaggatcgaagggaacgctctcgttcccggtcccctccttctcgg
cttaacgacgatgaagaaatagtcagagtacggttgcaagcggagcgtcgcgcccgtatg
gcgcggcttcgcgctgaaaatgatgtcgaagaagaaaacatatcgtctctagaggggaca
ggggatgaatcgaagaaagcgaggaaaaaactgaaatccagggaggattcccttcaagtg
gaagctgaggaactagaagggctggaggaagacgaacagatgcagcttctattgggtttt
ggcggagaatttggctccacaaaaggaaacaaagtagaagacaatcactctagttcagcg
aggggtgccgctgccaagcacaaagcaagaaagtaccgacagtacatgaacagaaaaaac
ggcttcaacagaccattggacaagatggattag
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