Phaeodactylum tricornutum: PHATRDRAFT_38525
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Entry
PHATRDRAFT_38525 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_38525
03110 Chaperones and folding catalysts [BR:
pti03110
]
PHATRDRAFT_38525
Enzymes [BR:
pti01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
PHATRDRAFT_38525
Spliceosome [BR:
pti03041
]
Complex C
Other components
PPlases
PHATRDRAFT_38525
Chaperones and folding catalysts [BR:
pti03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
PHATRDRAFT_38525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
EIF3I
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
7203485
NCBI-ProteinID:
XP_002182658
JGI:
38525
UniProt:
B7G642
LinkDB
All DBs
Position
16:complement(<314367..>316608)
Genome browser
AA seq
665 aa
AA seq
DB search
MPEEESKKRPRDNIAESESLKTPKRFWNREIPSSSHYHVSWMHAQTLTAVVTSTKYGYVV
SASQDGTVKFWKRLEVDGEPVEGQHPCLEFAKSFTAHAGPVLALAMDPDEGVCASVGADN
VIKFYDVSTFDATAMIRTERPLGTACCWLRSANRSETLLAVGAADTGDIYLHAPDRSRVV
QTLTMHGSNIVTCLAYNATHHCVVSTDQKGIIEIWDSWGTPDVSERTSDADEGTEDEKFA
LLVGGPLVPSRHGIVYGSKVDTQLYELVRKKTFATAIAIEPTGEHFAIYGSDRKIRIFEH
RTGKVRVTYDERLKAYDRIFGNSPFHLDTIEYGQRAALEREMDAESTVYSAGMALSKSAP
VGCAPQRIAFQFDGSGKYLLIPALVGIKVIEWRKNKLVKMIGQADASQMRFLSICLCPGD
AKVNRQLQLSRNASKKTSAATEADEIERASDVLLVALAYNQRRLYVFSQLDPVDDRDAPD
NVLVRRDVWNEAPSGQDQIHTESRHTNTTSQASRAVIRTTLGDIHLQLFSQVPKTIENFV
GHAKSGYYDNVIFHRIIKGFMLQTGDPLGDGTGGESIWGGEFEDEFVPGLRHDRPFTLSM
ANAGPNTNGSQFFITTVPCPWLDNKHTVFGRVTRGMDVCTVIENTKTDESDKPLADVQIQ
SIDIE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagaggaaagcaagaagcgaccgcgagacaacatcgccgaaagcgaaagtctc
aagacgcccaaacgcttttggaatcgcgaaatcccctccagcagtcactatcacgtctcg
tggatgcacgcacagacgctgacggcggtcgttacttccaccaaatacggctacgtcgtc
tcggcttcacaggatggtacggtcaagttttggaagcgtctcgaagtcgacggtgagccg
gtggaaggccaacatccctgtctggagtttgccaagtcatttacagcccacgcaggtccc
gtgctcgcactcgccatggatcccgacgaaggagtttgtgcctccgtgggggccgataac
gttatcaagttttacgacgtcagcacattcgacgcgaccgccatgatacgtacggaacga
ccgctcggtacggcgtgctgttggttacgctcggcgaatcggagtgaaaccttgttggcg
gtcggtgccgccgacacgggggatatttatctccacgcacccgacagatcgcgtgtcgtt
caaacattaacgatgcacgggtccaatattgtcacgtgcctggcctacaatgcgacacat
cattgcgtagtttcaaccgatcaaaaaggaattatagaaatatgggattcttgggggact
ccggatgtatcggaaagaaccagcgacgcagatgaaggcactgaggacgagaaatttgcc
ttgcttgtgggaggacctctggtaccgagccgacacggcatcgtctacggatcgaaagtg
gatactcagttgtacgaacttgttcgcaaaaagacctttgccactgctattgccattgaa
ccgacgggtgagcatttcgcaatttacggatccgatcggaaaattcgtattttcgaacac
cgtaccgggaaagttcgcgtcacgtacgatgaacgcctcaaggcatacgaccgcattttt
ggaaactcgccgttccatctcgataccattgaatacggacaacgagcggctctggaacgg
gaaatggatgccgaatcgaccgtgtattcggctggcatggcactgtcgaagagcgcaccg
gttggatgtgcgccacaacgcattgctttccaatttgatggcagcggcaaatacctgcta
attccggcactcgtgggtattaaagtgattgagtggagaaagaacaagctcgtcaaaatg
attgggcaggctgatgcgagccagatgcgcttcctctcaatttgcctctgtccgggtgat
gccaaagtaaatcgtcagttgcagctgtcccgcaatgctagcaaaaagaccagcgccgcg
accgaagcggatgaaattgaacgtgccagtgatgtgctgttagtagcactagcttacaac
cagcggcgcctatatgtgtttagtcagctggatccggtggacgatcgggatgcgccagac
aatgtgctggtacggagagacgtttggaacgaagcgccatccggtcaggatcaaatccat
accgaaagtcggcatacgaacactacatcccaagcttctcgagctgtcatacggacgact
ctgggagacatacatctgcagctattttcgcaagtacccaagacgattgagaactttgtt
gggcatgccaagtcaggctattacgacaatgtcatctttcatcgaattatcaaaggtttt
atgcttcagactggagatccactgggagacggtaccggaggggaaagtatttggggtggg
gaattcgaagatgagtttgtgcccggtttacggcatgatcgtcctttcactttgtcgatg
gccaacgctggcccaaacaccaatggatctcaatttttcattacgacagtcccttgtccg
tggctagataacaagcatacagtatttggacgggtcactcgcggcatggacgtgtgcacg
gttattgagaatacaaagacggatgagtcagacaagcctcttgcggacgttcagatccaa
agtattgacatagagtga
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