Phaeodactylum tricornutum: PHATRDRAFT_39526
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Entry
PHATRDRAFT_39526 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03246
translation initiation factor 3 subunit I
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pti03012
]
PHATRDRAFT_39526
Translation factors [BR:
pti03012
]
Eukaryotic type
Initiation factors
eIF-3
PHATRDRAFT_39526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_C
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
PorZ_N_b_propeller
Beta-prop_EIPR1
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_Vps41
WDR54
PEP5_VPS11_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
7195217
NCBI-ProteinID:
XP_002183663
JGI:
39526
UniProt:
B7G8W6
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Position
20:complement(52553..53919)
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AA seq
337 aa
AA seq
DB search
MRPYLLQGHERPITTIKFNYDGDLLFSASKDLVPSVWRADNGERLGTFNGHKGTVWDLDC
DRFTTRLLTASADATCRLWKCETGECLFVFNHRGPVRGVAWAEGSRKFATISDPFVEHNS
KIRVFDCPENGDLTDDDVMEIDLPKIGGKRVNPTNIQWTGNNEDLLVAFDNGEIRLYDPE
TGDLKEEIQAHDKKINRLRFNRDKTLFITSSADFTSKLFDPVDLKHLKTYRTDRPVNDAV
ISNKKDHILVGGGQDAMSVTTTSGKVGKFETRFFNMVYEDEFGSVKGHFGPINACRSYAS
GAEDGYVRLHLFDKDYLDMKDPVPEEDEAEEVPPTSQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaggccttaccttttgcaaggacacgaacgtccgattacgacgatcaaattcaactac
gacggcgacttgttgttttcggcttcgaaggatctggtgccatcggtttggcgtgccgac
aacggcgaacgcttgggtaccttcaacggacacaagggtaccgtctgggacttggactgc
gatcgcttcaccacgcgattgttgacggcgtccgccgatgccacttgccgcttgtggaag
tgcgaaacgggtgaatgtttgttcgtgttcaatcacaggggtcccgttcgcggagtagcg
tgggcggaaggctctcggaaatttgctacaatctcggatcccttcgttgagcacaattcg
aaaattcgagtgtttgactgtccagaaaacggtgaccttaccgacgacgatgttatggaa
atcgacctacccaagataggaggcaagcgtgtcaatcctaccaacatccagtggacgggc
aacaatgaagatctgctggtagcattcgacaatggtgagatccgtctgtacgacccagaa
acaggtgacttgaaagaagaaattcaggcgcacgataaaaaaatcaatcggctacgattc
aacagggacaaaacccttttcatcacgagttccgctgatttcacttccaaattattcgac
cctgtcgatctcaagcacttgaaaacttataggacggataggcccgtcaatgacgcagtt
atttctaataaaaaagaccacattcttgtgggaggagggcaggacgccatgagtgtaaca
acaacttccggtaaggtcgggaagtttgagacacgattcttcaacatggtgtatgaggat
gaatttggaagcgtcaaggggcattttggtccgatcaatgcgtgccgcagttatgctagc
ggtgctgaggacggatatgttcgtcttcatctgttcgataaggactatctagatatgaaa
gaccccgtaccggaagaggatgaagcagaggaagtaccgcccactagtcagtaa
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integrated database retrieval system