Phaeodactylum tricornutum: PHATRDRAFT_39994
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Entry
PHATRDRAFT_39994 CDS
T01075
Symbol
MER3
Name
(RefSeq) Mer3 meiotic cross-over helicase
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_39994 (MER3)
Enzymes [BR:
pti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PHATRDRAFT_39994 (MER3)
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Meiosis-specific proteins
Others
PHATRDRAFT_39994 (MER3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
Helicase_C
SNRNP200_wHTH
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
7195586
NCBI-ProteinID:
XP_002183894
JGI:
39994
UniProt:
B7GA67
LinkDB
All DBs
Position
21:541449..547112
Genome browser
AA seq
1710 aa
AA seq
DB search
MSETMLSSDDESNEANLIRDKLNRLLEQQHSSSPNSDHCSSTSGSGDSIRSGESSDSGSS
FNNEVNLDTALLVSSSDSKSLDHSNSGATYAQPPLCDNNPLFECDSTGDDGTFESSTLLY
RSASSPASRHHELGGDRLNSETFSNSKVASTYKVSDALSPLSDTNFAALEKQEDCTTVRH
KITSFDHSSLPSRKSVSTSNAGQNQAFPRSPPCEMSNTTYGNTDVPNEASELSQNSFLPL
SCPIASTHSSNTEKLPWQDPVPASTETTYSPAKISSIEKMTDGSDEMEVILREAERITDG
NDSIAVHSRSSAPADVHNDSSAVSCSSFSSPMPRSSISTPSSSITYRQAVQSSFPSQVMA
SNLRKPSQDCHAKSSIPTTSDHGSRPLESPWKLKPSTLNSASMLDVESGQLPLGTTSMDP
HKSRKIFDYAHRPLDKTQLAERPTEVEPFLYAPPTNHEIHEPMVHSFSAINRPIQHRNKI
PVQNIFQGSVVQFWKSKFDTFNYLQSEIANPLAYSDDNMVVSAPTGAGKTVVFEMAMARF
FSTDLVAQNHLYHGRQISKHRKIVYVSPSKALCEERYEDWGRRLSGMNLGVEVSLITGDG
DPSESFRDLASSHLILTTPEKWDSLTRRWTEKFYLFATVKLFLVDEVHLIADENRGCTLE
SIICRMKSIQRAARNKDTTSSDVSTSRSCMRVVAVSATLPNIAEIATFLGANEAYVFDQT
YRPVPLAVHAIGVGFVGDSSQSQYRFWSGMDREVPQIIHRFSKSRPTIVFCHTKADTEKL
ADLLATAHGIAVRGNSNAGVAGQTKLLKLQRVLFAGIAYHHAGLEAGDRRIVERAFSDGN
IRVLCATSTLAMGVNLPAHLVVIKGTKAWRGGGNGYQDLDQATILQMIGRAGRPGFDTSG
TAVIMTDNKSKVYFVNLATSGLRPAKSRLMTKLDDIINAEISQRVVESREAAFNWIKSTL
LFIQLRGNPDAFNLEAGSNTSVEAYFRKVCEESINRLHSIGTLLKDDKSCLLPSAASHIM
SQHLVTYSAMEIIVNLPFDASQHQMLKAICNMEGLRRPVRRSEKKLLNEMHKMVKYKLEG
PASKARVKESEQKAFVLLQASIGRIHINEFSLRQEMCGMVDFASRMLSATEEFSASGSQN
GGVLVQSFKLRRALATSLWCGRDGILGQFKSLGTETLVGLRFNGINTFEDVVASNEHMIE
KAAKRLPPFGSNLKAAVAKVVKSRLRLFCQLDSVSGSATPSHLICKVNRQPAVDSERLER
HDVDTKSSASQSVLTYALIVHTDRPGGCLLFERNISAPAIFVVECPPGFSVASIHLLASM
VGLDVMNSKNVSSCTSPLDPTAASVSSALLTAKNEHASLSPTREIGEQDFMHPARLPVEC
PRDQNENICFPTLAQRSISPETRPYRLPGYGPTTAVGRDPHRVWQQAKRTQIRSQQRVFA
RKKDNPFSCYQHDPNNAESHLDGLAGRNFTKQPKVSGIIPSEALRNLDEICNDALSNSKF
THDPSLQRNSRAGASKRPRGNSANDSHSVLAMKAAELNSVQYRGSRFEPMSFNSAYQDHR
VQFGSQFHNQMRPSQTPFLLDQSQQGGLGVMLSNRVPACIDGNAFSYHQRRPFSHNASFL
DQRSTPEGTNASFWRQNGLAENLSGQVYRAGEYTGLSTGQEEKNMAFAPPIAMSASSWNA
IKCIHPQDDLVGDDSKLADGKCENFDAAFF
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacaatgctgagttcggacgatgagtcgaacgaggccaacctcattcgggac
aagctcaatcgtctcttggaacaacaacattcgtcgtcgcctaatagtgatcattgcagc
agcactagtggtagcggtgattcgattcgttcaggtgagagcagcgacagcggctcttca
tttaacaatgaagtaaatctcgacaccgcattgctggtatcctcctcggattccaaatca
ctcgaccactcaaattcgggcgccacgtatgcccagcctccattgtgtgacaacaatcct
ctttttgaatgtgactcgacgggtgacgacggtacctttgagtcgtcaactcttctgtac
cgttcggcgagctctcccgcgtctcgccatcacgagttgggtggtgatcgactcaattcc
gaaaccttttccaacagtaaggttgcttctacctataaagtcagtgatgcgttaagtcct
ttgagcgacaccaattttgccgcgctagagaagcaagaggactgtactacagtgaggcac
aagataacatcgttcgaccacagttcgctaccttccagaaagtcggtttccaccagcaat
gcgggtcagaatcaagctttcccccgcagtcccccctgtgagatgagtaacacgacatac
ggaaataccgacgtaccgaacgaagcgtccgagctgagccaaaacagtttcctccctttg
tcttgtccgattgcttcaacccactcgtccaacaccgagaaactcccatggcaagaccct
gtcccagcgtcaaccgagactacctattcacctgcaaagatctcttccatcgaaaaaatg
accgacggcagtgatgaaatggaagtcattcttcgtgaggcggagcgaatcaccgacggg
aatgattcgattgcagtgcactctaggtcgtcagctccagccgacgtacacaatgattct
tccgccgtgtcctgctcgtctttttcttcgccgatgcctcgaagttcgatttcgacgcca
tcaagttcaatcacttaccgtcaagctgtccaatcaagctttccttcacaggtgatggca
tcgaacctacgaaaaccaagccaagactgccatgcaaagagttcaatcccgacgacttca
gatcatggctcgcgcccactcgagtcgccgtggaaacttaagccgagtactttgaattca
gcttccatgcttgacgttgaatctggtcagcttcctttgggaacgaccagcatggatcca
cataagagccggaaaattttcgactatgctcataggcctctcgacaaaactcagttagcc
gagcggccaaccgaagtagagcctttcttgtacgctcctccaactaatcatgagattcac
gaacctatggtccattccttttcggctataaatcgccctatccaacatcggaacaaaatt
ccagtgcaaaacatttttcaagggtctgttgtgcaattttggaagtcgaaattcgatacg
ttcaactatttacagtctgaaattgcaaatccgcttgcttacagtgatgacaacatggtt
gtctcagctccgactggtgctggaaagacggtcgtcttcgaaatggctatggcacgattc
ttcagcacggatttggtcgctcagaatcatctataccacggtagacaaatcagcaagcac
cgcaaaattgtatatgtctcgcctagcaaagctctctgcgaagagaggtatgaagattgg
gggcgtcgtctgtccggcatgaatttaggtgtggaagtgagcctaatcacgggtgacgga
gacccgagcgagtccttccgtgatctggcgtcgtcccacctgattctaaccacgccggaa
aaatgggatagcctgacgagacgttggaccgaaaagttttatctctttgccacagtcaag
ttatttcttgtagatgaggttcatttgattgcagacgaaaaccggggatgcactttggaa
tctatcatctgtcgcatgaagtcaatacaacgagccgctcgaaacaaagatacaacttcg
tccgacgtgagcacgtcgaggtcttgtatgagagtagtggccgtttccgcaacgctgccg
aatattgctgaaattgcaacttttctgggagcaaacgaagcatatgtgttcgaccaaacc
tatagacctgttcccttggcagtacatgctattggtgtcgggtttgtgggagatagtagc
caatcccagtatcgattttggagtggaatggaccgcgaagtcccgcagattatccatcgc
ttctccaaaagcagacccactattgtcttctgccacactaaagcagacactgaaaagctc
gccgacttactcgccactgctcatggtattgctgtacgaggtaactcgaacgctggtgtt
gctggtcaaactaaacttctaaagttgcagcgagtgcttttcgctggtatcgcttaccat
cacgcgggcttggaagccggtgaccgtcgaattgtagagcgtgccttcagtgacggaaat
atccgagtgctttgtgccactagcactttggcaatgggtgtcaacctcccggctcactta
gtggtgataaaaggaacaaaagcttggcggggcggcggcaatggataccaagatttggac
caggcaaccattctgcaaatgattggacgagccggtcgtccaggcttcgatactagcgga
acggcggtgataatgacggacaacaagtcaaaggtgtatttcgtcaatcttgctaccagt
ggcctcaggccggcaaagagtcgtttgatgaccaaacttgacgacatcataaacgcagaa
atttctcaaagagtggtcgagagtagggaagcagctttcaactggatcaaaagcaccctg
cttttcattcagctacgtggcaatcccgatgcatttaacctcgaagccggatcgaatacc
agcgttgaggcttactttcgaaaagtatgcgaagaatcgatcaatcgactacattcaatc
ggtactttgctcaaagatgacaagtcctgcctccttccttccgccgcgagccatattatg
agtcagcatttggtcacctattcggcgatggaaattatcgtcaacctgccgtttgacgcc
agtcagcaccaaatgttgaaggccatttgtaacatggaaggtttgcgtcgtccagtccgt
cggtcggaaaagaaacttctcaacgaaatgcacaaaatggtcaagtacaaacttgaagga
ccagctagtaaggcgagggtcaaggagtcagagcaaaaagcttttgttctcctgcaggca
agtattggtcgtatacatatcaatgaattcagccttcgccaggaaatgtgcggcatggtg
gattttgcgtcgcggatgctttcggcaactgaagagttcagtgctagcggaagccagaat
gggggtgttcttgtgcagtctttcaagctcagacgagcgctcgcgacaagcctctggtgt
ggcagagatgggattctgggccagttcaaaagtctcggaacggaaactctggtcggcctt
cgtttcaacggaattaatacctttgaagatgtcgtagcttctaatgaacacatgatcgaa
aaagcggcgaaaagattgcctccctttggatcaaatttgaaagcagcggtcgcaaaggta
gtgaaaagtagacttcgactattctgtcagctggactcggtatctgggtccgcaacacct
tcccatctcatatgtaaggtaaatcggcaaccagcagtagattcggaaagactggaaaga
catgatgtcgatacgaaaagttcagcctcacagtcggttctaacttacgcactgattgta
cacaccgatcgacccgggggatgtctgctgtttgaaaggaatataagtgccccggccata
tttgtagttgaatgccccccagggttttctgtggcaagcattcatcttttggcgtcaatg
gtcggtcttgatgtgatgaacagcaagaatgtgtcaagctgtacatcaccgctcgatcca
acagcggcatcggtttcgtctgccctgctgaccgctaagaacgagcatgcctccctgtcc
ccaacaagagaaattggagaacaggatttcatgcatccagcaaggcttcctgtagagtgt
cctcgcgaccaaaatgaaaatatttgctttccaacgttagcacaacgtagcatctctcca
gagacgaggccttaccgtcttcctggttatggtccaacaactgctgtcggaagggatccc
catcgggtgtggcagcaagcaaagcgaacacaaatacgatcgcagcagcgtgtcttcgca
cgcaaaaaggacaacccattttcttgctatcagcacgatccgaacaacgctgagtctcac
cttgacggccttgcaggacgaaacttcaccaaacaaccgaaagttagtggcattattccg
agcgaagcactgcgcaatttagacgaaatctgcaacgatgcgctgtcgaattcaaaattc
acacacgacccgtccttgcagaggaatagtcgtgccggtgcgtcgaaacggccacgaggt
aatagtgcgaacgatagccacagtgtgctggcaatgaaagctgccgagctcaactcagta
caatatcgtggatcccgatttgaaccaatgtcgttcaacagtgcctatcaggatcaccga
gtacagtttggttctcaatttcacaaccaaatgcgcccgagtcagacgccattcctactt
gatcaatctcaacagggtgggctaggagtaatgttgtcaaatcgcgttccggcttgcatc
gatggcaacgcgtttagctaccaccagaggcgtcctttttctcacaacgccagctttctg
gaccaacgcagcacccccgagggaactaacgcttcattttggagacagaacgggttagca
gaaaatctcagtgggcaggtgtatcgagcaggcgaatatactggtctgagtacgggacaa
gaggaaaagaacatggctttcgctccccctattgccatgtcggcgtctagctggaacgcg
atcaagtgcatccacccccaggatgatcttgtaggcgacgacagcaaactcgcggacgga
aaatgtgagaacttcgatgccgctttcttttag
DBGET
integrated database retrieval system
