Phaeodactylum tricornutum: PHATRDRAFT_40214
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Entry
PHATRDRAFT_40214 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K13130
gem associated protein 2
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_40214
Spliceosome [BR:
pti03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
PHATRDRAFT_40214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
7195724
NCBI-ProteinID:
XP_002184133
JGI:
40214
UniProt:
B7GAT3
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All DBs
Position
22:<416487..>417488
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AA seq
333 aa
AA seq
DB search
MSLPQACLPVQSRGHRRQRTDGNNGSQNGGLLDRAAFEDIASMDASSYLYMVVQQAKSLP
EVFEASRSPTISKRRTENDDEPQMGSAASLAYLLSDRTALVPPPTALHLPVAASVWTERT
LETFSRLRDYLEDCRLRGIGGKRTDRVLLPPMKDRAAWHIFCAGHAEAQGNAAAYYEDDT
LAIVAAAENDNDCNDDEDTEDPGDGASAIPTATWQRNLPEKGFAPTVSLLLQMDQVMIRR
VLGHLAYYIEEGWSPGPLSQWIYALLARLERPIHRDDAAMLYKFLRRLTHVRAALVLEND
RERDVLARVNVLIAIVGVYLEQGGGYANVLSLH
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcctcaagcttgtctgccggtgcaatcgcgtggacatcgtcgccaacgcacc
gatggaaataacgggagccaaaacggaggattgctggaccgtgcagcgttcgaagatatc
gcaagcatggacgcgtctagctacctgtacatggtagtgcagcaggccaagtctttaccg
gaagtattcgaagcctctcgatcccctacaatttcgaaaaggcgtacagaaaacgacgac
gagccacaaatgggttccgccgcgtccttggcgtatttgctgtcggatcggaccgccttg
gtgcctcccccgacggctctgcatctgccggttgccgcctctgtctggacggaacggacg
ttggaaaccttctcgagattacgtgactatttggaggattgccgtctccgaggtatcggc
gggaagcgcaccgatcgcgtgctcctgccgcccatgaaagaccgagcggcctggcatata
ttctgtgcgggacacgccgaagcgcaaggcaacgctgcggcgtattacgaagatgataca
ttagcaatcgtagcagcagcggaaaacgacaatgactgcaacgatgacgaagacacggag
gacccaggggacggcgcttccgctattcccacagctacgtggcaacggaatcttcccgag
aaggggttcgcccccaccgttagtttgttgttgcaaatggatcaagtcatgatccgtcgt
gttcttggccatttggcctactatattgaggagggttggtcgcccgggcccttgtcgcag
tggatttacgcattgctggcgcgattggaacgaccgattcaccgagacgatgccgccatg
ttgtataagttcctccggcgattgacccacgttcgtgccgcgctagtgttggagaacgat
cgtgaacgcgacgtcctggcacgcgtcaacgttctcatagcgattgttggagtatatttg
gagcaaggtggagggtacgcgaacgttttgtccttgcactag
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