Phaeodactylum tricornutum: PHATRDRAFT_40626
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Entry
PHATRDRAFT_40626 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_40626
Spliceosome [BR:
pti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
PHATRDRAFT_40626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
DUF1639
Motif
Other DBs
NCBI-GeneID:
7198486
NCBI-ProteinID:
XP_002184627
JGI:
40626
UniProt:
B7GBL5
LinkDB
All DBs
Position
24:complement(488508..489601)
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AA seq
292 aa
AA seq
DB search
MSSNRFAILDDDDTAPAVKKDSKPAKAAVEASKPDDRRRPNQNDRNTKFGRGGRAPSRDG
KRAYDRRSGTGRGKEIKKSGGGARNWGTDKAEAEVVFVGQEDKPEEINTEEVEEPAEPEP
VDNSMTYEEFLAAKAASSSELLKPTKEREVANEFTKVAAKVSEEEDFMVMGSGKARRNKQ
QNKAVKTLTPAFRVESGTVETDGHGGRGRNGRGEGRGSRGGRREGRGGRGEGPGRRGEGR
GGRGEGRGGRGEGRDGRGEGRSGRGRGLRGSGRGGGRDQQVNVLDTSAFPSL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaatcgttttgccatcctggacgatgacgataccgctccagccgtgaagaag
gatagcaagcccgccaaagctgctgtcgaggcttcgaagcccgatgaccgtcgccgtcca
aaccaaaatgaccgcaacacaaagtttggccgtggtggaagagcaccgtcgcgtgatggg
aagagagcttatgatcgccgctctgggacgggccgcggcaaagaaatcaagaaatccggt
ggcggtgctagaaactggggaactgacaaagcagaagcagaagttgtcttcgtaggtcag
gaagacaagcctgaagaaatcaatacagaagaggtcgaggaacctgctgagcctgaaccg
gtggacaactcgatgacctatgaagagtttctagctgccaaggctgcctcctcaagcgaa
ctactcaaaccgactaaggaacgagaagttgcaaacgagttcacgaaagttgcagcaaag
gtttctgaagaagaagattttatggttatgggaagtggcaaggcgagacgcaacaagcag
cagaataaggcagtgaagacactcaccccggctttccgtgtggaatcgggcaccgtagag
acggatgggcatgggggacgaggacgcaatggacgaggagagggacgcggaagcagaggt
gggcgtcgtgaaggacgcggcgggcgaggtgaaggacctggtaggcgaggtgaaggacgt
ggcgggcgaggtgaaggacgtggcgggcgaggtgaaggacgtgacggacggggtgaagga
cgtagcgggcgaggacgtggtctaagggggtcgggtcgcggtggaggaagagaccagcag
gtcaacgtcttggacacctcggcttttccgtctctgtag
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