Phaeodactylum tricornutum: PHATRDRAFT_41172
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Entry
PHATRDRAFT_41172 CDS
T01075
Name
(RefSeq) calreticulin
KO
K08057
calreticulin
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04141
Protein processing in endoplasmic reticulum
pti04145
Phagosome
pti04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PHATRDRAFT_41172
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
PHATRDRAFT_41172
04148 Efferocytosis
PHATRDRAFT_41172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pti03110
]
PHATRDRAFT_41172
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pti04091
]
PHATRDRAFT_41172
Chaperones and folding catalysts [BR:
pti03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
PHATRDRAFT_41172
Lectins [BR:
pti04091
]
L-type lectins
PHATRDRAFT_41172
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
7199028
NCBI-ProteinID:
XP_002185131
JGI:
41172
UniProt:
B7GDH4
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All DBs
Position
28:129840..131182
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AA seq
390 aa
AA seq
DB search
MKFTLLTVLAAAVAVPVTAEVYLKEQFNDEAWTSRWTESKDWKPESDMGTWKHTAGEWYS
DEADKGIQTSVDARFFGISAPLDKPYTSSKDKDLVIQYSVKHEQDLDCGGAYIKLLPGGK
SFQPAAFGGESPYAVMFGPDICGSSNKKTHVILHSNQKDENLLINKQVMCESDSVTHLYT
LVVRPDNTFEVFVDNKSVRSGNLADEFDFLEPKEIKDPDAQKPEDWVDKAKIADPEDKKP
EGYDDIPQELPDPDAVKPDDWDDEDDGEWEAPMIDNPEYKGPWKPKMIENPDYKGPWVHP
MVPNPDYKDDDEMFMVCKDTCTHVGFELWQVKTGTLFDDIIVTDSLEEAHAFAQETFFKK
KDGEKEMYDKIQAERQPEMPDMVSGETLSY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaccttgctgaccgttctggcggctgcagttgccgttcccgtcactgccgaa
gtttatctgaaggaacagttcaacgacgaggcatggacatcccgttggacggaatccaag
gactggaagccggaaagcgatatgggtacctggaagcacaccgccggtgaatggtacagc
gacgaagccgacaagggtattcagacgtcggtggacgctcgctttttcggcatttcggca
cctctcgataaaccgtacacctcttccaaagacaaggacttggtcattcaatacagcgtc
aaacacgaacaggatttggactgcggtggggcctacattaagctcttgccgggcggaaag
tccttccagccagcggcctttgggggtgaatcaccctacgccgtcatgttcggaccggat
atttgcggaagctccaacaagaaaactcacgttattctgcactccaaccaaaaggacgaa
aacttgctgatcaacaagcaagtcatgtgtgaatccgatagcgttacccacctgtatact
ctggtggtccgtcccgacaacacctttgaagtctttgtggacaacaagtcggttcggagt
ggaaatctggcggacgaattcgatttcctggagcccaaagaaattaaggatcccgacgcc
caaaaaccggaagactgggtggataaggccaagatcgccgaccccgaagacaaaaagccg
gagggctacgacgacatcccccaagaactccccgacccggacgcagtcaaaccggacgac
tgggacgacgaggatgatggcgagtgggaagcacccatgattgataatccggaatacaag
ggaccgtggaagccaaagatgatcgagaacccggactacaagggaccttgggttcatccc
atggttcccaacccggactacaaggacgacgacgaaatgttcatggtctgcaaggacaca
tgcacacacgtaggattcgagctctggcaagtcaaaactggaactctgttcgacgatatc
attgtgaccgatagcttagaagaagcacacgcatttgcgcaagaaaccttctttaagaag
aaggatggagagaaggaaatgtacgacaagattcaagctgaacgacagccggagatgccc
gatatggtaagtggcgagactctttcttactga
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