Phaeodactylum tricornutum: PHATRDRAFT_41210
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Entry
PHATRDRAFT_41210 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHATRDRAFT_41210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_41210
Spliceosome [BR:
pti03041
]
Complex B
Other components
Prp19-related factors
PHATRDRAFT_41210
Complex C
PHATRDRAFT_41210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
7199046
NCBI-ProteinID:
XP_002185149
JGI:
41210
UniProt:
B7GDL3
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All DBs
Position
28:205147..205854
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AA seq
235 aa
AA seq
DB search
MQPDCEPDTATEAHNVVPAGESPPLAPPEANTPTASATRRNQRLRQLKQRMNQARQLNQQ
AVQSEGQHLGSNGVAESQRVTAVPEQAVDAVRRAEAQAATAERQRFHVNDYHNPQGQHRN
YERSLRSLPSAHRGNVGVDVPLSTTTTTYDPLETAVDHPERERLGAQRLANELQRRIEKR
QKRDRKRKEKEDNAPDDEDVGYINKRNKHFNEKIKRNYEQHTAEIRQNLERGTAL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgactgtgagccggacaccgctacggaggcacacaatgtcgtgcctgccggg
gagtcccctccactcgcgccaccggaagcaaacactcccacggcttccgcgacccgccgg
aaccaacgtctccgtcaactgaaacaacgaatgaaccaggcacggcaactcaatcaacag
gctgtccaatcggaaggacagcatctgggatcgaacggagttgccgagtcgcaacgcgtc
acggcggttccggaacaagcggtggacgcggtacgccgggcggaagcccaggccgccacg
gcggaacgccaacgctttcacgtcaacgattaccacaatccgcaagggcaacatcgcaat
tacgaacgcagtttgcggagtttgccgtccgctcaccgagggaatgtgggtgtggacgtg
ccgttgtcgacgacgacgacgacctacgatccactcgagaccgccgtggaccatccggaa
cgggaacgactcggtgcacagcgactcgcgaacgaactgcaacggcggatcgaaaaacga
caaaaacgggaccggaaacgcaaggaaaaggaagacaacgcaccggacgatgaagacgtc
ggctacattaacaaacgcaacaagcatttcaacgaaaaaatcaaacgcaactacgaacaa
cacacggctgaaatacgacaaaacttggagcgtgggaccgcactgtag
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