Phaeodactylum tricornutum: PHATRDRAFT_41450
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Entry
PHATRDRAFT_41450 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14411
RNA-binding protein Musashi
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHATRDRAFT_41450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_41450
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PHATRDRAFT_41450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
COMMD1_N
Motif
Other DBs
NCBI-GeneID:
7199279
NCBI-ProteinID:
XP_002185444
JGI:
41450
UniProt:
B7GE93
LinkDB
All DBs
Position
30:complement(195287..196258)
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AA seq
291 aa
AA seq
DB search
MDSAAKQTPQSASGQATTSEPPQRNDNSNPQQGTGRPVPTGEATLNLSRPSMKIPPTKKD
SRKLFVGGLPSDVTDEEFRTFFEQFGELIDSIVMFDRETHRSRGFGFVTFEDPEVSSRLL
IMGSEDETGKDLGSRTGRLQMRDKVVEIKSAEPKDSTSRRFVSRSGSRQKAFCMPNSIHA
PLAVDPSVMHFATGPSDNPYTAYHVGYYGHYPYMAPVSYPGYEGCTHPYAYAADMPDTYY
MPYMQMTPVPYLPTSSHNLSGVQSTTPRIQIQEGEVMCATDPQAVDLTASN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggactccgccgccaagcaaacacctcagagcgcttccgggcaagccacaacttctgaa
ccgcctcaacgcaatgacaattccaatcctcagcaaggaactggacgccctgttccaact
ggtgaagcaactctcaatctttctcgtccatctatgaagatcccaccaacaaaaaaggat
tctcgaaaactctttgtgggtggtcttccttccgacgttacggacgaagaatttcgcacc
ttctttgaacagtttggggaactcatcgatagcattgtcatgtttgatcgcgagactcac
cgctctcgtggcttcggcttcgtcacatttgaggatcccgaagtgtcttctcgcctgttg
ataatgggtagtgaggatgaaacgggaaaggaccttggatctcgtacaggccggctacag
atgcgagacaaagtggtggagattaaatcggcggagcccaaagattcgacgagccgccgc
tttgtatctcgttccgggagtcgccagaaagccttttgcatgccaaactcgattcacgca
cctctcgctgttgatccgtctgtgatgcactttgccactggaccgtctgacaatccctac
accgcttatcacgtgggctattatgggcactacccctacatggctcctgtttcctacccg
gggtacgaaggctgcacgcatccatatgcgtatgctgctgacatgccagatacctattat
atgccatatatgcagatgactccggtcccttacttacccacttcctctcacaacctctcg
ggtgtgcagtccaccactcctcgcattcagattcaggagggcgaggtgatgtgcgcaact
gatccgcaggccgttgatctcactgcgtctaattaa
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