Phaeodactylum tricornutum: PHATRDRAFT_41721
Help
Entry
PHATRDRAFT_41721 CDS
T01075
Symbol
CPN60_2
Name
(RefSeq) nuclear-encoded-like protein of chloroplast gro
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHATRDRAFT_41721 (CPN60_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_41721 (CPN60_2)
03110 Chaperones and folding catalysts [BR:
pti03110
]
PHATRDRAFT_41721 (CPN60_2)
03029 Mitochondrial biogenesis [BR:
pti03029
]
PHATRDRAFT_41721 (CPN60_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_41721 (CPN60_2)
Enzymes [BR:
pti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PHATRDRAFT_41721 (CPN60_2)
Messenger RNA biogenesis [BR:
pti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PHATRDRAFT_41721 (CPN60_2)
Chaperones and folding catalysts [BR:
pti03110
]
Heat shock proteins
HSP60 / Chaperonin
PHATRDRAFT_41721 (CPN60_2)
Mitochondrial biogenesis [BR:
pti03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PHATRDRAFT_41721 (CPN60_2)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_41721 (CPN60_2)
Exosomal proteins of other body fluids (saliva and urine)
PHATRDRAFT_41721 (CPN60_2)
Exosomal proteins of breast cancer cells
PHATRDRAFT_41721 (CPN60_2)
Exosomal proteins of colorectal cancer cells
PHATRDRAFT_41721 (CPN60_2)
Exosomal proteins of bladder cancer cells
PHATRDRAFT_41721 (CPN60_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
7197068
NCBI-ProteinID:
XP_002177543
JGI:
41721
UniProt:
B7FRS0
LinkDB
All DBs
Position
2:36632..38487
Genome browser
AA seq
580 aa
AA seq
DB search
MLLLATTSSSAFVPQSSSKPSFALHAKKVSFKEDSRRALVAGINKVADAVRVTLGPKGRN
VVLERNYGAPEIVNDGVTIAREISLRDPEENVGARLIQEVAAKSDSKAGDGTTTSTIMTQ
ALVNNGMRAVTAGVSPVGLNRGLRKAARIIADEITAIATPVSGIEDLKNVATIASGSIEM
GRIIAQAADKVGDTGSTVVEESQTLIDEIEFTEGLTIDRGYISPYFVKDQERQVAELVNP
KILVTDAKIDDVNDIVPLLEQLVKTKDPLLIIAEDVTGEALSALVVNKMRGVLDVVAIKA
PGFGNRRREYTQDIAIATGASFVAEELGITLDSVTIDMLGTADRIVVGKEQTTIVTDGKQ
QEAIDARIAQLRREEETAETDYDADKCRERVASLGGGIARIKVGAATETELKDKKLRYED
ALNSVQSARELGIVPGGGACLAHLQITLKEKIMDAMETEDERQGALIMIKAMAYPAMQVA
ENAGIEGAVVLAKIQNLCEEKGFGYGWDAGSMEYCDLMERGIIDPAKVTINAIENSASVA
GLVLTTECLVTEIPIQMSEEDKQRMFDQQNMAAGMGPGIS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgttggcgactacttcttcgtcggcgtttgtcccgcagtcgtcgtcaaaacct
tcctttgccctgcacgccaaaaaggtgagctttaaagaagattcacgccgagcactcgtg
gcaggaatcaacaaagtggccgatgcggtccgtgtcacgctaggtcccaagggacggaac
gttgtcctcgaacgcaactacggcgcccccgaaatcgtcaacgacggggttaccattgct
cgcgaaatcagtctccgggacccggaagaaaacgtcggagctcggctcattcaagaagtc
gccgccaagtccgacagcaaggccggagacggaaccaccacgtccaccattatgacccaa
gcgctcgtcaacaacgggatgcgagccgttacggctggtgtcagtccggtgggcttgaac
cgaggcttgcgcaaggcggcacgaatcattgccgacgagattacggcgattgctacgccc
gtctcgggcattgaagatctcaagaacgtcgccaccattgcgtcaggatccattgaaatg
ggacgcatcattgcccaagcggcggacaaggtgggggacactggctccaccgtggtggaa
gaatcacagactctgatcgacgagattgagtttaccgaaggtttgactattgatcgcggc
tacatctcgccgtactttgtcaaggaccaggaacgtcaggtcgccgaactcgtcaacccc
aaaatcctcgttaccgacgctaagatcgacgacgtcaacgatattgtgccgctcctcgaa
caactcgtcaagaccaaggatccactgctcatcatcgccgaagacgtcactggtgaagca
ctgtcagccttggtagtcaacaagatgcgtggtgttttggatgtcgttgccattaaagcc
cctggtttcggcaaccgccgacgagaatacacccaagatattgctattgccaccggagca
tccttcgtcgccgaggaactcggtattaccctagattcggtcacaatcgacatgctgggt
accgccgatcgtatcgttgtgggtaaggaacagacaaccattgttacggacggaaaacaa
caagaagccattgatgcccgtatcgcccaactgcgtcgggaagaagaaactgccgaaact
gattacgatgccgacaagtgccgggagcgggtggcctcgctcggcggaggtattgccaga
atcaaggtcggtgccgcgacagaaaccgagctcaaggacaagaaattgcgttacgaggat
gccttgaattccgttcagagtgcccgtgagctcgggatcgtacctggaggtggggcctgt
ttggcgcatttgcaaatcaccttgaaagaaaaaattatggacgccatggaaactgaagac
gaacgtcagggtgccctaattatgatcaaggctatggcataccctgccatgcaagtggcc
gagaatgccggtattgaaggtgccgttgtactcgctaagattcaaaatttgtgcgaagaa
aagggtttcggatatggctgggatgctggttctatggaatactgtgacttgatggaacgt
ggtatcattgatccggccaaggtcacaatcaatgccattgaaaactcggcgtccgtcgcg
ggtctcgttctgacgacggaatgcttggtaaccgaaattcccattcaaatgagcgaggag
gacaagcagcgaatgtttgatcaacaaaacatggcggccggtatggggcccggtatttcg
taa
DBGET
integrated database retrieval system
