Phaeodactylum tricornutum: PHATRDRAFT_41928
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Entry
PHATRDRAFT_41928 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K05609
ubiquitin carboxyl-terminal hydrolase L3 [EC:
3.4.19.12
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pti01002
]
PHATRDRAFT_41928
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_41928
Enzymes [BR:
pti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PHATRDRAFT_41928
Peptidases and inhibitors [BR:
pti01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
PHATRDRAFT_41928
Ubiquitin system [BR:
pti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
PHATRDRAFT_41928
UBL-specific proteases (ULPs)
PHATRDRAFT_41928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
Motif
Other DBs
NCBI-GeneID:
7199987
NCBI-ProteinID:
XP_002179323
JGI:
41928
UniProt:
B7FXE5
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All DBs
Position
6:939842..940540
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AA seq
232 aa
AA seq
DB search
MSKQKWFPLESNPSLMNEYVAKLGFNTDLYEFVDVFSTEDWALQMIPQPVVAVLMLYPLT
EKQESFYGQDNLAPQDMDKVWFTKQRIGNACGTIGLLHTLLNVPEPLRIFPSDSWLHGFL
EDCPNPLDPVRKAEILERDAKIAKLHDQATSAENNQTDRGNLDDQLVTHFVALVNVNDQL
YELDGRKEAPVAHGPTTSATLLADACKVVQTFMQRDPDEVRFTILALAPKQE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcaaaaatggtttcccctggaatcaaacccttccttgatgaacgaatacgta
gccaagctcggattcaacacggatctttacgagttcgttgacgttttttctaccgaagac
tgggccttacagatgataccacaaccggtcgttgccgttcttatgctgtacccccttacc
gaaaagcaagaatcgttctacggccaggacaatctcgcaccgcaagatatggataaagtc
tggtttacaaaacagcgcatcgggaatgcttgtggtaccattggccttttgcacacactg
ctcaacgtccccgagccgctacgaatctttccatctgattcttggttacacggattttta
gaagattgccccaatccactggatcccgttcgcaaagccgagattctcgaacgcgatgcc
aaaattgccaagctccacgatcaagcgacttcggcggaaaacaaccaaactgatcggggt
aatctcgacgatcagcttgtcactcattttgtggcacttgtcaacgtgaatgatcaactc
tacgaactcgatggtcgtaaagaagcgcccgtcgcgcacggaccgacgacatcggcgacg
ttgctggcggacgcctgtaaagtcgtgcagacctttatgcaacgggatcccgatgaagta
cggtttacaatcctcgcgttggcgccaaagcaagaatag
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