KEGG   Phaeodactylum tricornutum: PHATRDRAFT_42100
Entry
PHATRDRAFT_42100  CDS       T01075                                 
Symbol
RPC157
Name
(RefSeq) rna polymerase C 157 kDa
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHATRDRAFT_42100 (RPC157)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pti03021]
    PHATRDRAFT_42100 (RPC157)
Enzymes [BR:pti01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PHATRDRAFT_42100 (RPC157)
Transcription machinery [BR:pti03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     PHATRDRAFT_42100 (RPC157)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF6798
Other DBs
NCBI-GeneID: 7202167
NCBI-ProteinID: XP_002181195
JGI: 42100
UniProt: B7G2E6
LinkDB
Position
12:373133..377428
AA seq 1281 aa
MPSRKPAHGGCLDPRLGVSDKVSACATCKRKLVDCAGHFGYIRLALPVFHIGFLRHTLHL
LQCVCKTCSRVLMPESDRQKHLSRMRSPKTDALSKAALFKKVVEKCKKVRVCPHCGGHNG
TVKKITGVPTLKIVHERYKGRNAEDELDELIANLEVSLKMNKDVGTAISGSSLPYEDLLP
TRALEIFTHISDDDCEVLWIDPLIGRPETLILQSILVPPVPIRPSVAMDVGGGSNEDDLT
VKLQEIIDVNVALELALMKGPQTRTIMEEWDFLQVQVAQYINGEMPGLQRPIGSKPMRGL
CQRLKGKQGRFRGNLSGKRVDFSARTVISPDPNLRVDQVGVPERVAKTMTYPERVSRYNI
EKLRQRVRNGPDVHPGANLIRMKDGSFVKSLSFGDRELVAKNLRYGDVVERHMEDDDVVL
FNRQPSLHKVSIMAHRAKVMEWKTFRFNTCVCAPYNADFDGDEMNMHLPQTEEARTEASL
LMGVKHNLTTPRNGEPLVAASQDFLSASYMLTQRDRFFTREQFCQLVSYYSDASEDIDIP
FPTILRPVELWTGKQVFGMMLRPNRKSSVLVSFENKEKNYTTNKYFCKNDGWVAFRNSEL
VSGNIAKKSIGDGSKSGLLYILLRDCGVHEAASCMDRWAKFCSRFMGGHRGLSIGISDVT
PSARLRDIKHGILSEGYKKERLITPMKQGRLELRPGCDLLQSLEEILNGILGRLRESAGQ
EAMKALPWTNTPRIMAECGSKGSPLNISQMISCVGQQAVGGMRIQDGFVNRCLPHFEYHS
LIPSAKGFVANSFYTGLTATEFFFHAMGGREGLVDTAVKTAETGYMARRLMKALEDLSLQ
YDSSVRNSENTVVQFTYGDDGLNPNMMENNDRPVDFERLRLHISQTTPCPTEDCLSAAAL
STTVEKKLAEPRFQALLPTGRVFMQEIRDFFNSLAENQNSRMTETQLELLLTEALDKCML
AYVEPGEAVGAIGAQSISEPGTQMTLKTFHFSGISSMNVTLGVPRLKEIINAAKLISTPI
ITAKLECDNNKVAARIVKAVIEKTTLGEVSKYMKEVYAPGSCYISVELDMDAIEQLKLNV
DVHSVRRSILYGTKGIAKNAGMQMLKAALPNVIVQGIPTVARAVINESNQSGTPTYNLLM
EGYGLQDVMGSPGIDGLHTTTNHVLEVEDVLGVEAARTQISAEIDNIMSAYGIGIDQRHL
LLLSDVMTFKGEVLGITRFGVSKMRESVLMLASFEKTTDHLFDAAVHGRTDTIVGVSECI
IMGMEVPVGTGLPALYWKCTN
NT seq 3846 nt   +upstreamnt  +downstreamnt
atgcccagtcggaaacccgcgcacgggggctgtctagacccacgtctcggagtgtcagac
aaggtctcggcctgtgcaacttgcaaacgaaaattggtggattgtgcgggacattttggc
tacattagattagccttgcccgtctttcatattggattcttacgccatacactacatctg
ctccaatgcgtctgcaaaacctgttccagggtactcatgcccgagtcggatcggcaaaag
catttgagccgcatgcgcagtccaaagactgatgcgttgagtaaggcggcactcttcaaa
aaggtggtggaaaaatgcaaaaaagttcgcgtgtgtccgcattgtggaggacacaacggt
acggtaaaaaagatcaccggtgtgccgacgcttaaaatcgtacacgagcgctacaaggga
cgaaacgccgaggacgagctggacgaactaattgccaatctagaagtctccttgaagatg
aataaggatgtcgggactgccatttctgggtcgagtcttccctacgaggatttgttgcca
actcgagctttggagatctttacgcacatctccgacgatgactgcgaagtcttatggatc
gatccgctcattgggcgaccagagacgctcattttgcagagtattctcgtcccgccagtt
cccattcgaccgtcggtggcgatggatgttggtggaggtagcaacgaggatgatcttacc
gtcaagttacaggagataattgatgtcaatgtggctttggaactggccttgatgaagggt
ccccagacacgcaccattatggaagagtgggactttttgcaagtacaagttgcgcagtac
atcaatggcgagatgccaggtttgcaaagaccgatcgggtcgaaacccatgaggggccta
tgtcagcgtcttaaaggaaagcaaggtcgatttcgagggaatctttcgggaaagcgggta
gacttttccgcccgtaccgtaatttctcctgatcccaaccttcgtgtagatcaagttggt
gtcccggagcgcgtcgctaaaaccatgacgtatccggaacgagtgtcacgttacaatatc
gagaagcttcgtcaaagggtccggaacgggccggacgttcaccctggggccaatcttatc
cgcatgaaggacggctcgttcgtcaagtcgctatcgttcggcgaccgagagcttgtggcc
aagaatttgcggtacggagatgttgtggagcgtcacatggaagacgatgacgtcgtattg
tttaatcgacagccatcgctacacaaggtttcaattatggctcatcgtgccaaggtcatg
gaatggaagaccttccgcttcaatacctgcgtgtgcgctccctacaacgccgatttcgac
ggagacgagatgaatatgcatttaccgcaaacggaagaagcacgtacggaagcctcacta
ctgatgggtgtaaaacacaaccttacgacgcctcgcaatggagagcctttggttgcggcc
agtcaggattttctctcggcgtcatacatgctgacgcagcgggatcgcttttttacccgg
gagcagttctgccagttggtgtcttactacagtgatgcgtcagaagacattgacatacct
ttccccacaattcttagacctgtagagttgtggacgggcaagcaagtatttggcatgatg
ttgcgaccaaacaggaagtcctccgttctcgtcagttttgaaaacaaagaaaaaaattac
acaacgaacaaatacttttgtaagaatgatgggtgggttgcgttccgaaacagcgaactt
gtaagtggcaacattgcaaagaaatctattggggacggcagtaaaagtggcttgctgtac
attctactccgagattgcggtgtgcacgaagccgcgagctgtatggaccgatgggcaaag
ttctgttctcgttttatgggtggtcatcgtggattgtcgatcggaatttcggatgtcaca
ccgtccgctcgcttacgagatataaaacatgggattctttctgagggatacaaaaaggaa
agattgatcacgccgatgaaacaaggaaggctagaactccgtcctggttgtgatttgttg
caatctctagaagagatcttgaacggaattcttggccgactacgagaatcagcaggtcag
gaagccatgaaggctctaccgtggacgaatacacctcgcatcatggcagaatgtgggtca
aaaggcagtccattgaacatttcgcagatgatatcttgtgtcggacagcaagccgtaggc
ggcatgcgtatccaagatgggtttgtaaacaggtgtctcccacatttcgaatatcacagc
cttataccatcagccaaaggatttgtagccaattcgttttacaccggtttaacggcaacc
gaattcttttttcacgccatgggagggcgagagggcttggtagacacggctgttaaaaca
gctgagactggttatatggcccgtcgattaatgaaagctcttgaggatctgtctttacag
tatgactcatcggttcgcaatagcgagaacacggttgtgcagtttacgtacggcgacgat
ggtttaaatccaaacatgatggagaacaacgataggccagtcgattttgaacgcctacgc
ttgcacataagccaaacaactccttgtccaactgaggattgtttgagtgccgctgcttta
agcactaccgttgagaagaagttggcggagccgagattccaggcgttactaccaacaggt
cgtgtctttatgcaggaaattcgagactttttcaactcattggcggagaaccaaaactcc
cgcatgacggagacgcaactcgagttgctgttgacggaggcattggacaagtgtatgctt
gcatatgtagagcctggcgaagcagttggtgcgattggagctcagagcattagcgaaccc
ggtacacagatgaccttgaagactttccatttcagtggtatcagctccatgaacgtgacg
ctcggcgtgccgcgattaaaggagatcattaacgcggccaaactgatctcaacacctatc
atcacagcgaagctcgaatgcgacaataacaaagttgctgcacgtatcgtgaaagcggtg
attgagaaaactactctgggtgaggtgtcgaagtacatgaaagaggtgtacgctcctggg
agctgctatataagtgttgaactagatatggatgctattgaacagttgaagctcaacgtc
gacgtacatagtgtccgtcgctccattctttacggaaccaaagggatcgcaaagaatgcg
ggaatgcaaatgctcaaagcggcgttacctaatgtaattgttcaaggaattccgactgta
gcgcgagctgttatcaacgaaagcaaccaatcgggtacaccgacatacaatttattgatg
gagggctacggtctacaagacgttatgggaagccccggtatagacggattacatacaaca
acaaatcacgtcttagaagttgaagatgttcttggagtcgaagccgcgaggacacagata
tctgctgagatcgacaatattatgagcgcatacggtatcggtattgatcaacgacatcta
cttttgctttcggatgttatgacgttcaagggagaagttttaggcatcacccggtttggt
gtttctaaaatgagggagagcgttctgatgttggcgtcgttcgagaagacaactgaccat
ttattcgacgcggctgtacatggtcgaacagacacaatcgttggagtcagtgaatgcatt
attatgggaatggaagtaccagttggaactgggctacccgcattgtactggaaatgcaca
aactga

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