Phaeodactylum tricornutum: PHATRDRAFT_42247
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Entry
PHATRDRAFT_42247 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHATRDRAFT_42247
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pti01007
]
PHATRDRAFT_42247
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_42247
Enzymes [BR:
pti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
PHATRDRAFT_42247
Amino acid related enzymes [BR:
pti01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PHATRDRAFT_42247
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PHATRDRAFT_42247
Prokaryotic type
PHATRDRAFT_42247
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
FTHFS
PRD1_P5_spike_N
TNFAIP8
Motif
Other DBs
NCBI-GeneID:
7195079
NCBI-ProteinID:
XP_002183471
JGI:
42247
UniProt:
B7G8H8
LinkDB
All DBs
Position
19:complement(<356590..>357993)
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AA seq
467 aa
AA seq
DB search
MDGPVSIKGWVRTVRKQKTLAFVEVNDGSNLSGIQCVIVFDKVDEATKAELDKVTTGCAV
ELTGPLVASQGGKQAVELAATVLRVVGACPAETYPLAKKRHTLEYLRSIAHLRPRTNTIA
AVARVRSHLAGAIHAFFQTQGFVYVQTPLVTASDCEGAGELFRVTTLNLDSVSTLPKAKN
ENGKEQDRVDYSEDFFGKPAYLTVSGQLGGETHACALGDIYTFGPTFRAENSQTSRHLAE
FHMVEPEMAFADLTSAMNNAENMLKYVVQHVLDSCGEDLEFFQKFYDKALMTRLEKLVQK
PFVRVSYREAIEFLQEEINKDPSKWQFPDVSFGTDLATEHERWLAETKFESAVFVYNYPK
AIKAFYMRDNEEDGGETVNAMDLLVPGVGELIGGSQREERLDVLEQKIADVGLDKEDYWW
YLDLRRFGSVPHAGYGLGFERLVTYVCGIENIREAIAFPRYPGNAEF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatggccctgtttccatcaaaggctgggtccggaccgtgcggaagcaaaagactctc
gcctttgtggaagtcaacgacggcagtaacctttccggcattcagtgcgtgattgttttt
gataaagtcgacgaagcgaccaaggcggaactcgataaggtcacgaccggatgtgcggtg
gaactcaccggcccattggtggctagtcaaggcgggaagcaagcggtcgaattggccgct
acagtcctgcgtgtcgtgggagcctgtccggccgaaacttacccgctcgccaagaaacgt
cacactctggaatatttgcgatcgattgcgcatttgcggccccgaacaaataccattgct
gcggtagctcgagtacgatcgcatttggccggcgcgattcacgctttttttcaaacgcaa
gggttcgtgtacgtgcagacgcctctcgtgacagcttcggattgtgaaggagccggcgaa
ctgttccgcgtcacgacgctcaatctcgacagcgtctcgaccttgcccaaagccaagaac
gagaacggcaaagagcaggatcgagtcgattacagtgaggactttttcggtaaaccggca
tacttgactgtctcgggtcagctggggggtgaaacacacgcctgcgcgttgggtgatatt
tacacgtttggtccgacgtttcgagccgaaaattcccaaacgagtcgccatttggccgaa
tttcacatggtcgaaccggaaatggcctttgctgatttgacttccgccatgaacaacgcc
gaaaatatgctgaagtacgtagtacagcacgtgttggactcctgtggggaagatttggag
ttctttcaaaagttctacgacaaggccctaatgacgagactggaaaaactcgtgcagaaa
ccatttgttcgcgtttcttaccgggaagcgatcgagtttttgcaggaagagatcaacaag
gatcccagcaagtggcaatttccagacgtatcctttggtaccgacttggcgacggagcat
gaacgatggttggcggaaaccaagtttgaaagtgccgtgtttgtgtacaactatcccaag
gccatcaaagccttctacatgcgtgataatgaagaggacggcggggaaacggtcaatgcc
atggacttgcttgttcccggcgtcggagaactgatcggtgggagtcaacgtgaggaacgg
ttggatgtactggagcagaaaattgccgacgttgggcttgataaggaagactactggtgg
tacctggatttgcgccggtttggatccgtcccgcacgccgggtacggtctcggattcgaa
cggttggtgacctacgtgtgtggcatcgaaaacattcgagaggcaattgcctttccccgg
tatcccggcaacgccgagttttga
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