Phaeodactylum tricornutum: PHATRDRAFT_42625
Help
Entry
PHATRDRAFT_42625 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14018
phospholipase A-2-activating protein
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PHATRDRAFT_42625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
PFU
WD40_Prp19
WD40_WDHD1_1st
PUL
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WDR90_beta-prop_4th
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
EVI2A
Motif
Other DBs
NCBI-GeneID:
7195989
NCBI-ProteinID:
XP_002176618
JGI:
42625
UniProt:
B7FNZ4
LinkDB
All DBs
Position
1:633304..>635642
Genome browser
AA seq
724 aa
AA seq
DB search
MQANWELSQSLTCDGQGIRCACVLPAPDGTADGFQILTGTQGGSLVAYGIPSGNLESSAY
RHDNAVTALATNATGTHYFTGYKDAVVRVFDVQHNLIAQLKGHDKAVTSLAYADGGKDGE
FLISGSWDGTAKIWRLANSSLVATLPNHENSVCVCVQGVDTGGMLHIATGSAGLAQNNTI
QGHSIRIWTVDVRITSDVKLLHTVANDHDGPIRDLCLAPPDASCLASCSNDGTVKLRVAE
TGDVLTTLTMLTSSHPPMLLSVATTTDQSCIVVGAEDGHAVVWDLSATERSPQILLHAQC
VWSVVPLPNGDFATCSDDGVIRIFTHCTERVAPLAEREAWEAEVAATQQKKSNGPSAEEI
AALPRWDQNYEKRGRSEGDVRVFQKNGVAIAAQWSAASQTWIEVGQVTGSNENTGTLNGV
QYDHLLPIEVDQSGGGVAKLQIGYNNGENPFVAAQRFIDDHVLPQHHLQDIANYIQQRAG
QQGPTIGNDSTVASGSPMVSYEYLPAPGYKQFGLPVKTASTTLAKVKSKIIEFGLLSDID
VEHLTHLLDTLSASSRYHSSKILDEELAVMEKMLSWQQPSQVFPALDLARLVLLHPDAAS
RERYGYWSRVVPKTIAIMAIESVEGPAAVAIPMLGLRLFSNGLKGGPGSCEAIANNVDAI
LEVTTRLVPSSNKNVRLALATLLYNTACYVRSNPGTDISDKFFPILWLALTQKKQRMHLS
CRRK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaactgggagctttctcaatccttgacgtgtgatggtcaaggcattcgttgc
gcctgtgttttgcctgccccggacggtacagcggacgggttccaaattctcacgggcaca
caaggaggcagcctcgtcgcgtacggtataccctcgggaaatctcgagtctagtgcctac
cggcacgataacgccgtcacggcgttggcgacgaacgccaccggaacgcattactttact
ggctacaaagacgccgttgttcgagtgttcgatgtgcagcacaacctgattgcacaactc
aagggtcacgacaaagccgtgacgagtttggcttatgccgacggaggtaaagacggtgag
tttctcatcagtggatcttgggatggtaccgccaagatctggaggctcgcgaactcgagt
ctggtggcgaccttgccaaatcacgaaaattctgtctgtgtttgtgtccagggagtggac
accggcgggatgctccatattgcgacggggtcagccggccttgcccaaaacaataccatt
caaggccattccattcgtatatggaccgttgacgtgcgcatcaccagtgacgtgaaactc
ctacacacggttgccaacgatcacgatggtcccatccgcgatctctgtttggccccgccc
gacgcatcctgcctcgcgtcctgttccaacgacggaaccgtcaagcttcgagtggccgaa
acaggggatgttttgaccactctgacgatgttgacgtcctcccatccacccatgttgctc
agtgtcgcgaccacaacggatcaaagctgtattgttgtaggcgcagaagacggacacgcg
gtggtttgggatttgagtgcgacggaaagaagcccccagatactgctccatgcgcagtgt
gtttggagcgttgtgcccttgcccaacggtgattttgcaacctgcagtgacgatggcgtt
atacgcatatttacacactgcaccgaacgggtagcgcccttggctgaacgagaggcctgg
gaagcggaagtagcagcgacccagcagaaaaagagcaacgggccgtcggccgaagaaatc
gccgccctaccccggtgggatcagaattatgagaagcgcggtcgctcggaaggagatgtt
cgagtctttcaaaaaaacggagtggcgattgccgcacaatggagcgcggcttcgcagact
tggattgaggttggccaggtaacaggctctaacgagaacaccggaacactcaatggcgtt
cagtacgatcatttgttacctattgaagtagaccaatctggtggcggtgttgccaaactc
cagattggttacaacaatggtgaaaatccctttgtagccgcccaacgtttcattgatgac
cacgttctaccgcagcatcatttgcaagatattgccaactacattcaacagcgcgcggga
cagcagggaccgacgattggtaatgacagtaccgtagcgtcgggttcccccatggtctct
tacgaatatttgccagcacccggatacaaacagtttggcttgcccgtcaagacggcatct
acgactcttgcaaaggtgaagtcaaaaataatcgaatttggtttgctatccgatatcgat
gtggaacatttgacacacttgctggatacactgtcggcgagcagtaggtatcactcgtca
aagattctcgatgaggagcttgccgtgatggaaaaaatgctctcttggcaacagccttca
caagtcttccctgcactggacctcgcgcgtcttgtactcttacatccagacgcagcctca
cgagaacgctacgggtactggtcgcgtgtcgttcctaaaacaatagctatcatggctatc
gaaagtgtggaaggtccggcagcggttgccattcccatgctcggtttacgcctcttttcc
aatggtctaaagggaggtccaggatcctgcgaagcgatcgcaaacaatgtagacgcaatt
ttggaagtgacaacacgtctcgtaccttcatcgaacaaaaacgtcagattggctttggct
acgctactatacaacactgcttgttacgtacgaagcaatcccggtacggatatttccgac
aaatttttccctattttatggctagctctgacgcaaaagaagcagcgaatgcatctttcc
tgtcgtcgaaagtag
DBGET
integrated database retrieval system