Phaeodactylum tricornutum: PHATRDRAFT_42673
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Entry
PHATRDRAFT_42673 CDS
T01075
Symbol
Sec23
Name
(RefSeq) hypothetical protein
KO
K14006
protein transport protein SEC23
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PHATRDRAFT_42673 (Sec23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_42673 (Sec23)
Membrane trafficking [BR:
pti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
PHATRDRAFT_42673 (Sec23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Cob_adeno_trans
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
7196326
NCBI-ProteinID:
XP_002177155
JGI:
42673
UniProt:
B7FP49
LinkDB
All DBs
Position
1:complement(753312..755977)
Genome browser
AA seq
759 aa
AA seq
DB search
MEGSWDVTASEEMSGTRLSFHCWPSSRLEATRSVAPFGALYTPLKKLPPQCAPQTTLPYD
PIRCSCHAVLNPYCQVDFRSKLWVCPFCLQRNHFPPHYADNISETNLPAELIPQYATCEY
ELQTVPDQGPPCFLFVIDTCAQKEEISELSDSLQQALNLLPTDALVGLITFGTNVSVYDL
SSDSIAKSYIFRGNREYSPGRVGELLGCNRHPGQQSQPNGQTSMGGPGQEVLERFLLPVS
ECSFVVESILDDLRCDPWPVPNDKRPARATGCALSVATSLLHLAIPRRGARIMLFTSGPC
TSGPGAIVSRMKGEDMRSHADLAKNVEPLHKPACEFYNKAPIPTNAPHHAVDVFACSLDQ
VGLLEMSELVEATGGLTVLGDSFGQSVFKESLRRVFNRFPEEVPQDGGQLQMAFNASLEV
LTSSEFKVSGAIGPVTSLHKAAPNVSEIEVGKGGTNAWGLGGVDPNTTVAIYFDVSNPGT
TPLPEGKRRFIQFLTKYQHANGRTRLRATTLCGSFDQEAAAVLTARMAVHQTESDEVADV
LRWVDRSLIRLCAKFAEYEPDDLNSFRLSPEFSLYPQFMFHLRRSQFLQLFNSSPDEAAY
YRYILSRENTTNSLVMLQPTLLSYSFNGPPEAALLDSESVRADTILLLDTFFHVVVFHGE
TIAAWREQGYHEQDEHAAFRALLEAPQSDAQLIMDARFPVPRYIVCDQHKSEARFLMAKL
NPSVTHNSNLDGSGSAQVNTDDVSLRVFMEHLMKLAVQT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcctgggatgtcactgcctcggaggaaatgtcgggaactcgtctttccttc
cattgctggccttcgtcgaggttggaagcgacgcgcagtgtcgctcctttcggggcgctc
tatacgcctctcaagaagctaccaccccagtgtgctccacagacgactctaccatacgat
ccgattcgctgttcctgtcacgctgtgttgaatccttactgccaggtcgattttcgttcc
aaactatgggtttgtccattttgcttgcaacgtaatcatttccctccgcattatgccgat
aacatctccgaaacaaatcttcccgcggaactcattccacagtacgcgacctgcgagtac
gaactacagacggtcccggatcaaggacccccttgttttcttttcgtcatcgatacttgc
gcacagaaggaggaaatctcggagctcagtgattcgcttcaacaggcgttgaacttgtta
ccaacagatgctttggtcggtcttattaccttcggaacaaacgtctcagtctatgacttg
agcagcgactccatcgccaaatcttacattttccgaggcaatcgagagtactctcctggt
cgtgtgggggaattgctcggctgcaaccgccaccccggtcaacagtcgcagccgaacgga
cagacttccatgggagggcctgggcaagaagttttggagcgttttctcttacctgtctct
gagtgctcttttgtcgttgagtcaatcctggacgatctccgttgcgacccttggccggtc
cctaacgataagcgtcccgcccgagcgactggctgtgccctttccgtagccacttcgctt
ttgcacctcgctattcctcggcgcggtgcgcgaatcatgctatttacgtctggtccgtgc
acctccggaccgggagcgatcgtgtcacgtatgaaaggcgaagacatgcgatcgcacgcg
gatctggccaagaacgtggagcctttacacaagccggcctgcgagttctataataaggct
ccaatcccaacgaatgcaccacatcatgccgtagacgtatttgcgtgcagtttggatcaa
gtcggcttgcttgaaatgtcggaacttgtcgaagcgacggggggtctgactgtcttggga
gattcgtttggacagtcggtattcaaagaatcgcttcggcgtgtattcaaccgttttccg
gaagaagttccacaggacggagggcagttgcagatggcttttaacgcctcgctcgaagtt
ttgacaagcagtgagttcaaggtttctggtgcaataggtcccgtcactagtttacataag
gcagctccgaacgtatccgaaatcgaagtcggaaagggaggaacgaatgcgtggggtctc
ggtggcgtagatccaaacaccacggtcgcaatctattttgacgtttcaaatcccggaact
acacccttaccggaagggaagcgtcgtttcatccagtttttgacgaaatatcaacacgca
aatgggcgaactcgacttcgtgcaactacgctctgtggcagtttcgatcaagaagcagct
gctgtgctgacggcacgcatggcagttcatcaaactgaatcagacgaggtcgccgatgtt
ttgcgttgggtggatcgtagcttgatccggctttgtgccaagtttgctgagtacgaacca
gatgacctcaactcattccgactctctccagagttcagtctctatccgcagttcatgttt
catttgcgtcgttctcaattcttgcagctgttcaattcgagccccgatgaggcagcatac
tatcgttacatcctatcgcgggagaacacaacgaactctctggtaatgttacaacctact
ttactttcgtactcattcaacggcccaccggaggcggccctcctcgattcagagagtgtg
cgcgccgacacgattcttttgctggacacgttctttcatgtcgttgtgtttcacggtgaa
actattgccgcctggcgtgaacaaggctatcacgaacaagacgaacacgctgcttttcgg
gctttgctcgaagccccacagtctgatgctcaattgataatggatgcccgcttccctgtc
cctcggtacattgtttgtgatcagcacaagagtgaagcacgattcctgatggccaagttg
aatccttccgtaacacacaattcaaacttggatgggagcggttcagcgcaggtcaacacc
gacgacgtttctttgcgtgtgtttatggaacatttgatgaaactggccgtccagacgtaa
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