Phaeodactylum tricornutum: PHATRDRAFT_42729
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Entry
PHATRDRAFT_42729 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pti01002
]
PHATRDRAFT_42729
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_42729
Enzymes [BR:
pti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PHATRDRAFT_42729
Peptidases and inhibitors [BR:
pti01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
PHATRDRAFT_42729
Ubiquitin system [BR:
pti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
PHATRDRAFT_42729
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
7196363
NCBI-ProteinID:
XP_002177189
JGI:
42729
UniProt:
B7FPC0
LinkDB
All DBs
Position
1:complement(915431..>918453)
Genome browser
AA seq
1003 aa
AA seq
DB search
MSKKRNAKKRRREQRRQMEEHSRLTNDSFQDQQRATSTNKHSKGDGAPPSFDKSRSVNSS
SLPTAVDGFGSQKRSIAAIQFVYPERNGRKLYRFQKELLDTFIVPPQEKIEKGLPEFVAT
NVSLNDILYPDSNREKQSDSGSQLKGDSSQKSPKILHGEHHTNNVVKELRQKNLDVQSLS
GQSQGQLSGMSVEDAVRDKLGCRPRANSTDGELNLPQRGLCDERKVLESFKWIPTNVNLS
YPKGFVNLGNTCFLNSTVQCLAYLPPFCQSLLSILSHESKHGEKRKTSQGRKVTFILRSL
FSQVHGIDGGTTHSGSSLAPRAIVQAVPTLGSCGSRKGYKFRPGRQEDAHEFLVHLLDAM
NDGELKEAGINQNASGWRDRLPIPRLDETTFIHRIFGGYFRSQVRCTSCNNRSNTYDPLL
NLSLEVSRKACNSVAQALHEFTRKETLDSQNQWKCSGCKKYVCATKQLTVFRPPLSLCIQ
LKRFTYSGRLKFSVGFGSFGNGGGGQKISKSIEFPAQLKLPLSDGRSCGYSLTGIVIHVG
GSASSGHYTAYVRKPGGGSKSQWFHMDDSFVEAVSEQTVLRQRDAYLLFYCREEVKLEFP
TPPMSAKEAQELGRAKARARADSLTELQASASTSLITITSKSLCHESTAALEQKRKVNRV
EENSNGTVASFPPNLRKQEQNENGDLLEKQRNETSFSAPGKKTDSAELLPTPITAPDFGF
EIQRSSVKQFSRRSPDPSKVVVSSKSQRERYGGNIQLGQSPMMKPAIALPDQGEESSSEE
SSPSDDSSVQDQNDSTSSARISLPVIKSEAKTSFADVSSSSENEEKAFRTINMTESESPH
AVQKKALEKPRTRIVLDRGEGREKVEVMMGPRSETKAWTPRAGAVTKSEDYALLGNQRVG
RWDDEGNDVATRQHDRGRENLIQQMDKKESNRKRKMYLDRWDAMLDQGQTKKVKEKTDSI
KPTTPKKNVFQRIQSSVQRMNRGRAKGHFRPETQKKKRGRRSL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaaaggaatgccaagaaacgacgtcgggaacaacgccgccagatggaagaa
cattccaggcttactaatgattccttccaggaccagcaaagagctaccagtacgaacaaa
cattcgaagggggatggtgcaccaccatcatttgacaagagtcgcagcgtcaattcatct
tctctccctacagcagtggatggcttcggttcccaaaagcgttccatcgctgcaatccaa
tttgtttaccccgaacggaatggaagaaaactttacagatttcaaaaggagctgctcgac
accttcatcgttcctccccaagaaaagattgaaaaagggctccctgaattcgtcgcgacg
aacgtgagtttgaacgacattctatacccggacagcaacagagaaaaacaatccgattct
ggtagtcagctcaaaggcgactcctctcagaaatctccaaaaatcctgcatggcgagcat
cacaccaacaacgtagtaaaggagctgcgtcagaagaacttggatgtacagtcactttct
gggcaatcgcaaggccagctgtcggggatgtccgtggaagatgccgttcgcgacaaactt
ggatgtcggcctcgtgcgaattcgacagatggagaactcaatttaccgcaacgagggctt
tgtgatgagcggaaggtactagagtctttcaaatggatccccacaaatgtcaatttgtct
tatccgaaaggctttgtcaatctgggtaatacgtgctttctgaatagcactgtacagtgc
ctcgcctacctaccaccattctgccaatccttgctttcaatattatctcatgaatcaaaa
catggtgaaaaaagaaagaccagtcaaggaaggaaggtaacatttatcttgcgctccctc
ttttctcaagtacacggcattgatggtggtaccacacactctggaagttcattggctcct
cgtgccattgtccaagcagtgccaactcttggttcctgcggtagtcggaaagggtacaag
tttcgacccggtcgacaagaagatgcacatgagtttttggtgcatttgctagatgccatg
aacgacggtgagctgaaagaagcgggaatcaaccagaatgcaagtggatggcgtgatcga
ttgccaattcctcgcctagatgagacgactttcatacatagaatatttggtggatatttc
cgaagtcaagttcgctgcacatcctgtaacaatcgcagcaacacgtacgatcccttacta
aacttgtctctggaagtcagtcgcaaggcgtgcaactcagttgctcaggctttgcacgag
tttactcgcaaggaaaccttagactctcagaatcagtggaagtgttcgggctgcaaaaaa
tatgtttgtgctacaaagcagttgactgtatttcgaccacctttgtctctttgcattcaa
ttaaagcgattcacatacagcggtagactaaaatttagtgttggcttcgggagcttcggc
aatgggggaggaggacaaaagatatcgaaatctatcgagtttccagcccagctgaagctt
cctttgagtgatggtcgctcctgtgggtattccttgaccggaattgtgatccatgtagga
ggtagtgctagttctggacattacacggcgtatgttcgcaagccaggtggtggtagcaaa
tcacaatggtttcacatggacgactctttcgtcgaagctgtatcggaacaaacagtcctt
cgacaaagagatgcctacttgctgttctactgtcgcgaagaagttaaacttgagtttcca
acacctccaatgtcggccaaggaagcgcaagaacttggcagagccaaagctcgcgcccgc
gcggacagtttaacagaattacaagcaagcgcatcgacatctttaatcacaatcactagc
aagtcgctttgccatgaaagtacagcggctttggaacagaaaaggaaggttaatagagtg
gaggagaactcgaatggtacggtggcttcttttccaccaaatctgcgaaagcaggaacaa
aatgagaatggagacttgttggagaaacaacggaatgaaacatccttttcagccccaggc
aagaaaactgacagcgccgaactactgccaacgccaatcacagctccggattttggcttt
gagattcaacgctcgtcagtaaagcaatttagccgtaggagtccggatccgtcgaaagtg
gtagtttcctcgaaatcccagcgggaaagatacggaggcaacattcagctcggacaatca
ccaatgatgaaacctgccattgcacttccggatcaaggcgaagaatcctcgtcggaagag
tcctcacccagcgacgattcttccgtacaagaccagaacgacagcaccagttccgcaagg
atttctctgccggttattaagtcggaggccaagacgtcattcgccgacgtttcttcctcg
tccgaaaacgaagaaaaagcgtttaggacaataaatatgacagaatccgaaagtccacat
gctgtccagaaaaaggcgttggagaaaccgcggactcgcatcgtgcttgatcgtggtgaa
ggccgtgaaaaggtggaagtcatgatgggtccgcgctccgagaccaaggcgtggacgccc
agggctggggcggttacaaaaagtgaggactatgcgcttttggggaaccagcgagtagga
aggtgggatgacgaaggcaacgatgttgcaactcgccaacatgaccgcggccgcgagaac
cttatccaacaaatggacaagaaagaatccaaccgaaagcgcaaaatgtacttagatcgc
tgggacgccatgctggatcaaggccaaaccaaaaaggtgaaagaaaagactgattctatc
aagccgacgacgcccaagaaaaatgtgttccagcgaatccaaagcagcgtgcagcgtatg
aatcgaggccgtgcaaaaggacactttcgacccgagacgcaaaagaagaaacgcggtcga
cgcagtctctga
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integrated database retrieval system
