Phaeodactylum tricornutum: PHATRDRAFT_42749
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Entry
PHATRDRAFT_42749 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K20292
conserved oligomeric Golgi complex subunit 5
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_42749
Membrane trafficking [BR:
pti04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
PHATRDRAFT_42749
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COG5_C
Dynactin
DHC_N1
Motif
Other DBs
NCBI-GeneID:
7196376
NCBI-ProteinID:
XP_002176696
JGI:
42749
UniProt:
B7FPE1
LinkDB
All DBs
Position
1:958597..961687
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AA seq
1002 aa
AA seq
DB search
MDSSRSSSNRASNSSASLSANSLPSQKADQTAAAAASLNLLLREDRLLVIHGLTESGTQP
DKVAFPYAAALLADGDDSNTVNTKQRADGALQDVERKLALVESLAVKLSRTSPEAVAGHL
LRLHGYHLPKEGLKEDKPSSTTLSAVRDKADRLERQSEVLENVARRVEGSLSRGLKRMET
ACTRLERVLSLSNTLKMILRLQFENSKLQNYDLEDLRDLTRAAASVSVVEDLLKRSELQA
SIEAIQKIRPEVERTATDVRQSAAMLLQDQYHQKNAIHQLGGTLQVYYHLGELPGAVWKV
VENAHGKAESTSRDLWNALTLMNLTEQAKKTAKDSRSVEKKLKQMRAEAASQWANGIYDV
STQVRNLQRVLMRKSDPIQRQFFVDVVAAASIPAAFRDSSLGKDFSLFGLFWGRFCKSLG
IILEDILQQDNGKHRSDVASLYPSVRSVSNDMLSTLQDNLNAGNSALEDLGTAATPGILG
GSALLDDTFLDWTTGQFDVEENPQSATTPDSWTHTTQRSASAKHPSQRFSASGGTGSATM
SQIYQSMEWNTLQGDKKGRHGLYPLQQAFIEACTDRLCSPLQFMFPENVALDDDGVAIAS
GLSMLPSKYDIQRFDENIRQEISLADPKEGGGDLSSVTMIANCVVSMISELCLRAKNALS
GIGESGYLNSDWSMTESLKHDRKVTVILFTVANYLRIAPDTVFLAPYRPSISLQQEEAAS
VCQVALQPALKEIEKMVKNSVTSPLGRAINKRIGDTMAKMHQGVYLGSNVGIDEDSPAFV
QKHLNGIYEIISKEILSKLPPEYGSAVATSVAMFSIYNFVSNFTLLRPLGESARLHITQD
LADLELALEQLMLKSGNSVSLHFIGNGKPYLELRAVRQMLFWTGLDSADKQAVDVAKSLL
REPWMKDVRPSTIFHYLYSYAPSFLSSPYHTRRMKPEAYVRLLVKPDGSVEETEDDAWMT
VMASCDAYQQRASSGGSNMDGDIRVAEKLLTMGPDVMRRRGH
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggattctagtcgttcatcaagcaaccgagcttcgaactcatctgcttcgctaagtgcc
aatagtttgccttcccaaaaggcggaccagacggcggcagcagccgcgtcactgaacttg
ttgttgcgtgaagatcgtctcctggtgatccatggtttgaccgaatcgggtactcagcct
gacaaggtggcctttccgtacgcggcggcacttttagcagacggagatgatagcaatact
gtcaatacgaaacaacgtgctgatggagcgttgcaggatgtcgagcggaaactagctttg
gtcgagagccttgccgtgaaactcagtcgcaccagccctgaggccgttgcaggccatcta
ctcagattgcatggatatcatcttcctaaagagggccttaaagaagataagccatccagc
acgacgctatcagcggttagagacaaagctgatcgcctggaacggcaatccgaagttctg
gagaatgtagctcgacgagtggagggatcattgtcacggggcttgaaacgtatggagact
gcgtgtactcgtcttgaacgggttctgtcactgagcaatacgctaaaaatgatactgaga
cttcagttcgaaaatagcaagttgcaaaattacgatctggaggacttacgtgacctgact
cgtgccgccgccagcgtctcggtagtcgaggatttgctgaagcgctctgaactacaagcc
tcgattgaagccatacaaaagatacgccccgaggtcgaacgcactgcaactgatgtacgc
caatcagccgctatgctgttgcaggatcagtatcatcaaaaaaatgctattcatcagctg
ggcggtactcttcaagtgtattaccatttaggagaattaccgggggccgtttggaaagta
gtggaaaacgcgcacggtaaagcagaatctacatctcgagatttatggaacgcattgacc
ctaatgaatttgacagaacaggccaaaaagacagccaaagatagccggtccgtggaaaag
aagctcaagcaaatgcgggcagaagctgcatctcaatgggcgaatggtatctacgacgtg
tcaacacaggtgcgaaatttacagcgagtgcttatgcgcaaaagcgatccaatacagcgc
caattttttgtggacgtcgtggccgccgcatcaattccagccgccttcagagattcgtct
ctcggaaaagacttttctttgtttggtctattttgggggcgcttttgcaaatccctggga
attattttggaagatattttgcaacaggacaatggaaaacatcgctcggacgtcgcaagc
ctgtatccgtctgtgcgtagcgtttcgaacgacatgttgagcactttgcaggataatttg
aatgcaggcaattcagcattggaggaccttggaactgctgcaaccccaggtattctcgga
ggatctgctctcttagatgacacatttctggactggacaacgggccagttcgatgtagag
gagaatccgcaatctgccaccacacctgattcctggacccatactactcaacgcagcgca
tcggcgaaacacccttcgcaacgtttttcggcctcaggtgggacaggctctgctacgatg
tctcaaatatatcaatcgatggagtggaatactttacagggagataagaagggacgccat
gggctttatccattacaacaagcatttattgaagcctgtacggacaggctatgttctcca
cttcaattcatgttcccagaaaacgttgctcttgacgacgacggtgtcgccattgcttcc
gggctcagtatgttgcccagcaagtacgatattcaacgctttgacgaaaacatccgtcag
gaaatttcgttggctgacccgaaagaaggcggcggtgatctaagcagtgttactatgata
gccaactgtgtcgtgtctatgatttcagagctctgcctccgagcaaagaatgcgttgagt
ggtattggagaatcaggatatctgaatagtgattggtcaatgacggaatcgctgaagcat
gatcgaaaggtgacagtgattcttttcactgtggcaaattacttgcgtatcgcgcctgat
acagtgtttttggcaccataccgtccgtccatttcattgcaacaagaagaagcagcgagc
gtctgccaagtcgcactgcaaccggctctcaaggagattgagaaaatggttaaaaattct
gtgacctcacctttaggacgagcaatcaataagcgaattggtgacaccatggcaaaaatg
catcaaggtgtctatcttggtagcaatgtgggtatcgacgaagactcccctgcctttgtg
cagaaacacttgaacggcatttacgaaatcatttcgaaagaaattctttcgaagttgcct
ccagaatatgggtcggctgtggcgacatctgtggcaatgttttcgatctataattttgtg
tcaaattttactctgcttcgacctttgggtgaatcggctcgtctgcatattacgcaggac
ttggccgaccttgagcttgcactggaacagctcatgttgaagagcggaaattctgtttct
ttgcattttattggaaacggcaagccgtacttggaactccgtgccgttcgccaaatgctg
ttttggacggggttggacagcgctgataaacaagccgtggatgtcgccaaaagcttgttg
cgcgaaccgtggatgaaggatgtacgtccgtcaactatctttcactatttgtactcgtac
gcgccttcgtttttgtcatccccataccatacgagacgtatgaagccagaagcttacgtt
cggttgttggtgaagccagatggctccgtagaggagacagaagacgatgcttggatgaca
gttatggcgagctgcgatgcttaccaacaaagagcaagctctggaggctcaaatatggat
ggagacattcgagtggctgaaaagcttttgactatgggaccggatgttatgcgtcggcga
ggacattag
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