Phaeodactylum tricornutum: PHATRDRAFT_42831
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Entry
PHATRDRAFT_42831 CDS
T01075
Symbol
BMS1
Name
(RefSeq) ribosome biogenesis protein BMS1
KO
K14569
ribosome biogenesis protein BMS1
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHATRDRAFT_42831 (BMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_42831 (BMS1)
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
90S particles
GTPase
PHATRDRAFT_42831 (BMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
AAA_22
MMR_HSR1
Tsr1_G-like
AAA_16
PduV-EutP
GTP_EFTU
RsgA_GTPase
ABC_tran
AAA_5
AAA_29
nSTAND3
Rad17
nSTAND1
AAA_33
ATPase_2
NACHT
AAA_19
RNA_helicase
AAA
AAA_18
AAA_28
AAA_14
Motif
Other DBs
NCBI-GeneID:
7196490
NCBI-ProteinID:
XP_002176751
JGI:
42831
UniProt:
B7FPQ2
LinkDB
All DBs
Position
1:1264825..1268692
Genome browser
AA seq
1096 aa
AA seq
DB search
MEDATQDHHKHKTRKEGRGAKEKKKDKRQQLQNDRVERHNPRAFSVANIGRTKRTIQRNA
DRAQKKEYVPLNDRRAAEVHETPPSLVVVMGPSGVGKSTLIRSLVKLYTNYTLTTVTGPI
TVVAGKNKRITFMECPNDTAAMLDCAKIADLVLLCVDAKFGFEMETFEFLNILQTHGFPK
VMGIFTHLDQFRTAKNLRKTKKLLKHRFWTEIYDGAKMFYFSGVINGKYLKNECKQLTLF
ISRVKYRPLVWRNTHPYVLVDRHEDVTNPNAIEMDNLCDRSVTFYGYVRGTHLKPNMKVH
VIGVGDYIMADVSVLPDPCPIPDKEQERTTLKKKDSLLFAPLSNVGAVSFDKDAVYIDIG
RVNYTKKENLSLSSLINNTNGTGGKDEETDVSEEGEYDSDAPADVRVGVDENMGKSTLRI
FKGSQAVQAGSDSSDEESDGENESSGGASDNLGTRLRRKAELGTQNESTDEDSDGSEDDK
SSCSSGDVPDEDYLIGEGSYNESSDQSAVSASNFQNKESGIDYEPDGRGLHWKSRIAETA
SQSFLERQSAHVNLQEMIYGKGKSSVVSDDDMMEESAEREGGDSSGDDDDDFFKLKRSDG
KRMAKSGRTASIRNKFVTGKWEKSKVEEFGEFEDLETGEKFGQADDYDEEKKVDGADTKD
DDAENEYIEALKREKEARLARNREEFGEEGERSRLRHEGFRQGLYCRIQIDGLPAAFFES
FNPHMPLVLGGLTPQETSMGLIRCRFKKHRWHRKILKCNDPLVFSVGWRRFQSMPTFSTE
DQNGRYRYLKYTPEHMHCLATFYGPQVPPNTGILAIQNLSGNVAGFRIAATGIALELDAS
FPIVKKLKLVGTPTKIYKNTAFVTGMFNSDLEVSRFEGASIKTVSGIRGQVKKSLREGQP
GSFRATFEDKILLSDIIFCRTWMPVEIKKYFNPVTNHLVGNVLGGWRGMKPKAQLQHETK
TPIEVNADSIYKPIERPDRHFKKLIVPKRLEQALPYKNKPKNLEKRKKKGYVSNRAVVME
ADERKKTTFIQALNTIRKEKVAIRKAKNEERKRDKAKEKAKKDEAILAIRKANKKRQYRA
EGKRDKARDSKRMRND
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgctacgcaagatcaccacaaacataaaactcgcaaggaaggtcgtggtgcc
aaggaaaaaaagaaagacaaacgccaacagctacagaatgatcgtgttgagagacacaat
ccgagagctttttcggtcgccaatatcgggcggactaaacgcacaatacagagaaacgct
gatcgagcgcaaaagaaagaatacgtaccgttgaatgatcgacgggctgcggaagtacat
gaaacgcctccgtccctagtggtcgttatggggccttccggagtcggcaagtcaacgctc
attcggtcgcttgtcaagttgtacacaaactatacgttgacaaccgtcacgggaccgatt
accgtagttgcaggcaagaataagcgtatcacgttcatggagtgcccgaacgatacggcc
gcgatgttggattgtgccaaaatcgcggatcttgttctactgtgcgtcgatgccaaattc
ggttttgaaatggagactttcgagtttctcaatatcctgcaaacacacggatttccgaaa
gtcatgggcattttcacccatttggaccagtttaggacagccaagaatctgcgaaagaca
aaaaagctgctcaaacaccgattctggaccgaaatttacgatggagccaaaatgttctac
ttttctggggttattaacggaaagtatttgaagaacgaatgcaagcagctgaccttattc
atttctagagtcaaatatcgacctttggtctggcgaaatacccatccttatgtgctcgta
gatcgccacgaagatgttaccaatcccaatgcaattgaaatggataatttgtgcgatagg
agcgtcacattttatggctatgtaagagggacacatttgaaacctaatatgaaagttcac
gtcattggcgtaggcgactatatcatggctgatgttagtgtcttaccagatccatgtccc
attccggacaaggaacaggagcgtactactttgaaaaaaaaggactccttactatttgct
ccactgtccaacgtcggtgcagtttccttcgacaaagatgctgtctacattgacatcggt
cgcgtcaattatacaaaaaaagaaaatctctctttgtcttcactaatcaacaacacaaat
ggcacagggggaaaagatgaggaaaccgatgttagtgaggaaggtgaatacgactctgat
gcgccagctgatgtgcgtgtgggcgtcgatgaaaatatgggcaagtcgacgcttcggatc
ttcaaaggaagtcaggctgttcaagcaggctccgatagtagtgatgaagaaagcgatggg
gaaaacgaaagctcaggtggcgccagtgataatcttggtacacgactgagaagaaaggcc
gagcttggcactcagaacgaatctactgatgaagacagtgacggcagcgaagacgataaa
agcagttgctcctctggagatgtacctgatgaggattatttgattggagaaggatcgtac
aatgaatcaagtgatcaaagcgcggtatcagcgtcaaatttccagaataaggagagtgga
attgattatgaaccagatggacgagggcttcactggaagtcgcgaattgctgaaacagca
tcgcagtcttttttggaacgccagtcagcccatgtgaacctgcaggaaatgatatatggg
aagggaaagagctctgttgtgagcgacgacgatatgatggaagaaagtgcggaaagagaa
ggcggagactcatcgggtgatgatgacgatgatttcttcaagttgaaaaggtcggatggg
aagagaatggcaaaatcagggaggacagcttcaatccgaaataagttcgtaactggaaaa
tgggagaaaagcaaagttgaagaatttggagaatttgaagatcttgaaacaggagagaag
tttggacaggcggacgactacgacgaggagaaaaaagtcgatggcgcagatactaaagat
gatgacgcggaaaatgaatacatcgaagcattgaagcgggaaaaggaggcacggcttgca
cgaaatcgcgaagagttcggtgaagagggtgaacgatcgcggttacgacatgaaggcttc
aggcaagggctttattgtcgtatacagattgatggactgcctgcggcattcttcgaatct
ttcaaccctcatatgcctttggtactggggggcttgacgccgcaagaaacgagtatgggt
ctgattcgctgtcgtttcaaaaagcatcgctggcacaggaagatccttaagtgcaacgat
ccgcttgttttctctgtgggttggcgccggtttcagagtatgcccacgttttcaacggaa
gatcaaaatggccgttaccggtacttgaagtatacgccagagcatatgcactgtttggcc
acgttctacggacctcaggtgcctccaaatactggcatacttgccatccaaaatttgtca
ggcaacgtagctggattccgtatagcggctaccggcattgccttagaactggatgcatcg
tttcccattgtaaaaaagctcaaattggtcggtactcccacgaaaatttacaaaaacact
gcctttgttaccggcatgtttaacagcgatctggaagtaagccgatttgaaggagccagc
ataaagactgttagtggcattcgtggtcaagtgaaaaagtcgctacgggaaggacagccg
ggatcctttcgtgctaccttcgaagacaaaatattgctttcggatattattttctgccga
acatggatgccggtagaaatcaaaaagtattttaatcccgtgacgaaccacttggttggc
aatgtcttaggaggttggcgtggaatgaaaccaaaggcccagttacaacatgaaacgaag
accccgatcgaagtgaatgcggattcaatctacaaaccgattgaacgacctgatcgccat
ttcaagaagctcattgtaccgaagcgactagagcaagcgctgccttacaaaaataagcca
aagaatttggagaaacgaaagaagaagggttacgtatcaaaccgagctgtagttatggag
gcagacgaacgaaagaaaactacctttattcaagcccttaatactatccgtaaagaaaag
gtagctatccggaaggcaaagaatgaagaacgcaagagggacaaagcaaaagaaaaagcc
aagaaagacgaagctatcctggccatccgcaaagcaaacaagaaacgccagtaccgcgct
gaaggcaaacgagacaaggctagagactctaagcgcatgcgaaatgattaa
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