Phaeodactylum tricornutum: PHATRDRAFT_42942
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Entry
PHATRDRAFT_42942 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K20164
DENN domain-containing protein 5
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_42942
Membrane trafficking [BR:
pti04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
PHATRDRAFT_42942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
ArfGap
dDENN
DUF3490
Motif
Other DBs
NCBI-GeneID:
7196775
NCBI-ProteinID:
XP_002176812
JGI:
42942
UniProt:
B7FQ36
LinkDB
All DBs
Position
1:<1585903..1591659
Genome browser
AA seq
1474 aa
AA seq
DB search
MSLSLGVASPEQPVASVTKTLAKLCSIASNRSCADCRVTLIDSSQVHASFNPKIELPSSQ
YNNFRLNHVNFAPPNYSPSKIPETLDPPVDPSLVAASYVGGHGVFVCALCGAAHKLLGRS
ITVVYAVQDSSTWSVEEVQLLVKGGGNNRARSVLEAHIPHSWKQKRPNADSTIADRLTFV
RAKYEALAFVLPPSGPFANRAWRAILDRHQDEWEGNWGADLHSFSELQLGESHSQRASRN
LMQSVENGNRESILPNRLVDYFCVVTPSEFVIPDMLGLDLSELSSPEDVLLVPEVTDCFP
NQEAHADTEFPKHIGSLVVPDGCRPSLTPRPPSFFSFVLTCGDGVRLYGGALCLYDNDSD
VENLKEKFRISGYEGQLPGWMGSERSRLVHDQDTRSSSFQSESDVYVDVVYFPKVLVVVS
HYPFFDVWRKFLLQIYRIALVGAPLPIERFIANFVGEVPLPPPGKILVKFGLTVNDTWSI
GRPPENQLPLADFSFQPLFAALSVSNVMVVIGCLLEEGRVALLSRHYAMLAPTAEALVSL
LFPFHWQGMYLPVLPYNMIDILGAPVPFLVGLHSRYLVDVPAGSRPRGVVFVDLDRDVIH
LGYEYDEVTPRSSPALPERQALKLKSKLETHASVAYVECDSVFSAAATKAATILTGNEEE
LHNSYRDPYARASKSESCPTSVRRKDIFGRLDRAYADNELQVPISGFLSEHGQFYEQDAS
STPDSKGQRFKFLRAVRPRGGLKSKISADSSGSERFHVTGSPGTKLLDKDDPSGFDSSEI
RNAFLRLFVSIFQSYRHYLDKNGFRSEAFIDSLNCSERSSEFLHCVVKTQFFSRFLDERI
QNPSDPEIRFFDESIIAKINRSKKQTFSKIGRGGGKRETSFLKDDSNMVNETFTPPPPSN
WGLPDDGRTYHYGSFPALNPELFGKVRRPMKWPRYDQRSSVRTSRRISALAQANEKAFVA
RALKPVSKTPKMLMAETKRGVKNLDTALSALSSPFVPSSPMRETNRERRATGSSDFSMSD
ISLSSALVMRDDIVSTAEGVVLNARRKQAILLGIIIKLQTHCRLHLVLKKDHQRESFRVS
AEGDRSNLETNAIICLQKWYRVLSVGRSTREWFRKLRFATCRMQSLTRDRMVRAGFLLLV
TAICRAQARIRGFQTRKIVASIVEHRLRTYREHIFLLWKASHTPLSYRCKFWPILKVESY
LRVQMAEAEVHRLWSKLNIPLPTSMKNLSTEQPKIVKSASLLRMNFETHWACIILNIEKP
ILILDFSQKGNSKVTAGPEAQRINSERVQIYDRISALKLEQQLALFDRFSVPLKGKRKKL
ALAVSIWHATKLADESTALMLTLFTELNDSTNINFKAPTKKSLRRFPPSPAITPLKRALW
AHVALEDRIRLNTLEVARIGLHDIPRLSHKVVGNNAVQTSGKNRLELMRRVLNCGASGVN
TGETKSLQARHLFKPPAMFNRSHASKSDSIREVE
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttctttgggagtagcttccccagaacagcctgtggcctctgtgacgaaaacg
cttgctaagttgtgttcaatcgcttcgaatcgctcgtgtgccgactgccgtgttacgtta
atagattcctcccaagtgcacgcttcctttaatcccaaaatcgaactgccttcaagccaa
tacaataattttcggctcaatcatgtcaatttcgcccctcctaactattctccttcaaaa
ataccggaaactctcgacccaccggttgacccgagccttgtcgcggcttcctacgtcggc
ggacacggcgtattcgtatgtgccctctgcggagcagcgcacaagctcctcggtagaagc
attaccgttgtttacgctgtccaagattcttccacttggagtgttgaagaggttcagctc
ttggtcaaaggcggcggaaataatcgggcacgatctgttttagaagcgcatatacctcac
tcgtggaagcagaaacgaccaaatgccgacagtacaatagcggatcgtctaacattcgtg
cgagcgaaatacgaggcgctcgcatttgtgttacccccatcgggtccgtttgcgaaccgg
gcttggagggcgattctggatcgccaccaggatgaatgggaaggcaattggggtgctgat
ttacattcgttctcagagctgcagttgggagagtcgcattctcagcgtgcctcgcgcaat
ttgatgcagtcagtcgaaaacgggaatcgtgaatcgatccttcctaacagattggtagac
tatttttgtgtggtgaccccttctgaattcgtaattcctgatatgttgggcttggacctt
tcggagctatcatctccggaggatgtattgctggttcccgaggtaactgactgctttccg
aatcaggaagctcacgcagatactgaatttcccaaacacattggctcacttgtcgtgccc
gatggctgccgaccgagtcttaccccacggccaccatccttcttctcctttgtattgacg
tgtggcgacggcgtacgcctttatggcggcgccctttgcctgtacgataatgattctgac
gtagaaaatcttaaggaaaagtttcgaatctctggctatgaaggacagctgccaggatgg
atgggatcagaaaggtcgcgtttggtgcatgatcaagataccaggagctcttctttccag
tccgaatctgatgtctatgtggatgtcgtttactttcccaaggtgctagttgtcgtatcg
cattatccgtttttcgacgtctggagaaaatttttgttacaaatttaccgaattgcgttg
gtcggagccccgttgcctattgaacgcttcatcgccaactttgtaggcgaagtgccgctg
cccccgccgggcaaaattctggtcaaatttggtttaacagtgaacgacacctggagtatt
ggacgacctccagagaatcagctaccacttgctgatttttcttttcagccactttttgct
gcgctgtcggtttcgaacgtcatggtggtgataggatgcttgctggaagagggacgagtc
gctttactgtcgaggcattacgccatgttagcacctacggcagaagcgcttgtgagtctt
ttatttccgttccactggcaaggcatgtaccttccagtcttaccgtacaatatgattgac
atcttgggcgcccctgttccattcttggttggtttgcattcacgatatctcgtcgatgta
ccagccgggtcaagaccacgcggtgtcgtttttgtggatctcgaccgtgatgtcattcac
ttgggctatgaatatgacgaagtaactccacgctccagtccagcccttcctgaacgacag
gctttgaagcttaagtcaaagttggaaacgcatgcgtctgtagcgtacgttgaatgcgat
tctgtgttctctgcagcagcaacgaaggcggcaacaattcttactggcaatgaagaagag
ctccacaatagctacagggatccatacgctcgagcttcgaaatccgaatcatgcccgact
tcagtgcgtaggaaagatatttttggaagactggacagagcctacgcagacaacgagtta
caagttccaatctccggctttctttcggagcatggacagttctatgagcaagatgcgtcg
tcgactccggattccaaaggacagcgcttcaaatttttgcgcgccgtgcgtccgagagga
ggactgaaatcaaagatatcagcggattcctcgggtagcgaaaggtttcatgtcactggt
tcacctgggacaaagttgttggacaaggatgatccatctgggtttgactcttccgagatt
cgaaatgcatttctccggcttttcgtttcgatattccaatcttaccgccactatctcgac
aaaaatggttttcgttccgaagcgtttattgattcgttaaactgttcagagaggagctca
gagtttcttcattgtgtggtgaaaacacagtttttctcaaggtttttggatgaacggatc
caaaatcctagcgatccagaaatccgtttcttcgacgaatccattatcgcaaagataaat
cggtcaaaaaaacagactttctccaaaattggacggggcggcgggaaaagggaaacgtcc
tttctaaaggatgattcaaatatggtcaatgagacgttcacaccccctcctccctcaaac
tggggtttacccgatgatggtcgcacctatcactacggttcctttcctgcgttgaaccct
gagctattcggtaaggttcgccgtccgatgaaatggccccgttatgatcaaagatcatcg
gttcgaacgtctcgtagaatctccgcacttgcgcaggcaaatgagaaggcttttgttgcg
agagcattaaagcccgtgtcgaaaaccccaaaaatgttgatggcagagacaaagcggggt
gtgaaaaacctcgatactgcattatctgctttgtcaagcccatttgttccatcttcccca
atgcgagagaccaatcgcgaaaggagagcgactggtagctctgacttctcaatgagtgat
atttcactgtcgagtgcacttgttatgagggatgatattgtatctactgcagaaggagta
gttctcaacgcacgacggaagcaggcaattctacttggcattatcataaaactgcaaaca
cattgcagattgcatcttgtccttaaaaaggatcatcagagggaaagtttcagagtgagc
gctgaaggtgatcgtagcaatttggagaccaatgcaattatttgtctgcagaagtggtac
cgagtgctatcggtgggtcgttccaccagagaatggttccgtaaacttcgttttgctaca
tgcagaatgcaatcccttacgcgtgaccgaatggtgcgtgccggcttcttgttattggtt
acagccatttgtagggcgcaagcacgtatccgaggttttcaaactcgaaaaatcgttgca
tccattgttgagcaccggcttcgtacctatagagaacacatcttcttgctttggaaggct
tcgcatacacctttgagctatcgatgcaagttttggccaatactgaaagtcgaaagctat
ctgcgcgtgcagatggctgaggcggaggtacatcgactgtggtcaaagttgaatatacct
ttgccaacgagcatgaagaatttgagtacagagcagccaaagatcgtaaagtccgcttct
ttgttgcgcatgaactttgaaacgcattgggcttgcattattttgaacattgagaagcca
atactaattttagatttttcccaaaagggcaacagtaaagtaacagctggaccagaggcc
caacgcatcaattcagaacgggttcaaatttacgaccgaatttcggctttgaagctcgag
cagcagctggccctatttgatagattcagcgtcccgttgaagggcaagagaaagaagtta
gcgctggcggtgtcgatttggcacgccactaagcttgcagacgaatcgacggctctcatg
ctgactctctttacagaattgaatgactccacaaatattaactttaaagcgcccacaaag
aagagtttgcgacgatttcctccatctcccgcaatcactcctttgaaaagggcattgtgg
gcccacgtggctttggaagaccgtatccgtttgaacactttagaggttgctaggatagga
cttcatgatatccctcgcctctcacataaggttgtcggaaacaatgcagtgcaaacgtcg
gggaaaaaccgcttggagctcatgaggcgtgtcctgaattgtggggcttcaggagtcaat
acgggcgaaacaaaatcactgcaggctaggcaccttttcaaacctcccgcaatgttcaat
aggagccacgcatcaaaatctgatagtatccgcgaagttgagtag
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