Phaeodactylum tricornutum: PHATRDRAFT_42944
Help
Entry
PHATRDRAFT_42944 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHATRDRAFT_42944
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pti01001
]
PHATRDRAFT_42944
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pti03021
]
PHATRDRAFT_42944
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_42944
Enzymes [BR:
pti01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
PHATRDRAFT_42944
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
PHATRDRAFT_42944
Protein kinases [BR:
pti01001
]
Serine/threonine kinases: Other
TAF1 family
PHATRDRAFT_42944
Transcription machinery [BR:
pti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PHATRDRAFT_42944
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
PHATRDRAFT_42944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
Motif
Other DBs
NCBI-GeneID:
7196191
NCBI-ProteinID:
XP_002176813
JGI:
42944
UniProt:
B7FQ37
LinkDB
All DBs
Position
1:1592525..1597584
Genome browser
AA seq
1422 aa
AA seq
DB search
MAAPPLDFEALLSREYRPARIARLIPREAYHPENNQKKKSVSIKHSTAALEDATRRRAEE
ETSRLVLSLVTQTSAFIQHLPESERRDVSSLLTKRPPVVSSWPAYETIPARFHEIELGDW
ESKVRWKIEEEPEGESKYSNRDPTDLLRRPRNPYLDNLVLDESTICWDGSLEKLQEKARN
TPLILELGVAGQSVARHVYQNTVLSAQRPTPALKSDAYQMRREREWANPITSTAEVSKAG
SLHADKDKMAALIEARQKQRAQMAEDKTNRVTEAMGTLALGGGKGRTITSSLMGPGGTER
SGRPSRDVGSSGLHEAEYIEQLDMINSHSLVRDLSKVLLRQYHRPKLPLSVVRQDLSWQF
QIRFAPTSKKTEVTGASGSYQAIMTGAHAGAISKAKLRSEADLSPTEGKLILLEYCEERP
PIQLTKGMASKIVNYYRGDKAHCPVSAGGGDRPARRKRAEPIAGEADARSSRAERLPRLE
GPSRETSVLEWVGKVPKKSQKERAEQDAIDILPEGVTENLHPKVHGPFLGEVEDSTTVTG
IITNLFVAPMFLHEPETTDFLMVLTPPSGAARPGQRESMSVILRDLPTSTFTVGQTEPRV
RVFAPNTQGEKNFVGPFVSYQIARALARSQGREGHGLRFDEIQDRVLPNLELPSNALRPR
LKQVALYDKNTQIWTTKQIGFEEYPGVDALGRTIAPEGVAAFESACAASRRLSDLGIHQL
LAGSHTVLSVGVIMVYISGQLNAAKDLSRKMKKLAELRRSNKSISAVQVAFYEQAAAIIE
SHFKILRQKHEIAQFIYEQLQLAPWHLTGEFIDVHKKGDGTGMMKLTGLGDPSGQGEGFS
FIREADSKPSKSVGNAALSAEVKKITGTEDDLRKLTMKQMASLLRSYGMTQEKIDTLKRW
DRVHVIRDLSTKAASDGIGDGLERFARGEKMKLSEQKQMYRDRVRVIWRRQIAALSMDDK
VAGSTEGAAIADGENEVSGMAQQSQSNKPDSTSKLGSDSDSSDDDDDLAAALEDEMLDRS
EANQLVAEHTGGGEADGGLGQLRAAAQDHEMNKDARELAALKRQREEERAVREGLQSNKP
KVESFDTQMRSNRKVIRKKVVKTHPDGHQTTTFKFVLRPDEVGKIMARLQQDNSEDHRRK
KEFQYEANSDEKPPGQALFEDEDDFEYSSRGRFADKRGGNRKRRAGGRATPRGTLQFGKL
KSKISKEERMRKRKREEEELEVYTASAKHKGTNNRKERGSIRNRRPHVIFSEKLEAIRSA
VEARPGALPFVKPVNRRLLPKYYEVISDPIDLQTIRDKIKRYEYRSADNLVRDFDLMKSN
AVKFNGQTSPIAQEAIAIHEFVSNQIESHRSELSALETAVQDQMNGKPKKKVKKGLMKSS
GSGNTARIGGISVNLGDFQGMQFEGNDSDSGDEVSFTGLLDF
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccgccgcttgactttgaagcccttctttccagagaataccggccggcacga
atcgctcgcttaattccgcgagaggcctaccatccagaaaataatcagaagaaaaagtct
gtttcgatcaagcattctacggctgcgctcgaggacgcaacgcgacgacgagccgaggag
gaaacctcacgattggtattgagccttgttacgcagacttctgcttttattcagcatctt
cctgaatcagagcgacgggatgtgtcgagtctgctgacgaagaggcctccggtggtctcc
tcttggccggcgtacgagaccatcccagcacgattccacgagattgaactcggcgactgg
gaatcgaaggttcgttggaaaattgaagaagaaccagagggcgagtccaaatattccaat
cgagaccctacggatttactgagacggccccgaaatccctacttggataaccttgtatta
gacgaatccacaatttgttgggacggatcactcgagaaactgcaggaaaaggctcgaaat
actcctctgattttagaacttggcgtagctggacaatctgtagcccgtcatgtgtatcaa
aatacggttctttctgcacaacgccctacacctgcacttaagtcggatgcctatcaaatg
cggcgagaacgggaatgggccaatccaattacttccacagcagaagtctctaaagctggt
tcgctgcacgctgataaggacaaaatggcggcgttgatcgaggctcgtcaaaagcaacga
gcacaaatggccgaagacaagacgaatcgcgtgacagaagccatgggaacgttggctttg
ggtggtggaaaaggacggactatcacttcctcgctgatgggtccaggaggaactgaacgc
agcgggcggccgtcccgagatgtgggttcatcgggattgcatgaggccgaatatattgag
cagctcgatatgattaatagccatagtctcgtgcgcgatctctccaaggttctgttacga
caatatcatagacccaagttgcccctcagtgtcgttcgtcaagacctgtcctggcaattc
cagatccgctttgctcccaccagtaaaaagacggaagttaccggcgcttcaggatcatac
caggcaattatgacaggagctcacgcaggtgcgatatcaaaggccaagctgcgcagcgaa
gcggatctgagtccaacagaaggcaagcttattttgcttgagtactgcgaagagcgccct
ccaatccaactaacaaaaggcatggcgagcaagattgtcaattattaccgtggagacaag
gcacattgccctgtttcggctggtgggggtgaccggcccgcacgcagaaaaagagccgag
cccattgctggagaggcagacgctcgatcgagccgtgcagaacgacttcctcggttggaa
gggccaagtcgggaaacgtcggttttggaatgggttggcaaagttcctaagaaatcacag
aaggagcgtgcggaacaagatgcaatagatatccttccggagggtgtaactgaaaactta
catcccaaggtccacgggccatttcttggcgaagtcgaagacagcacaacagtgaccgga
attattacaaacttgttcgtcgcgccgatgtttcttcacgaacctgaaacaactgacttt
ttgatggtcctcacaccacctagtggagcggcaaggcccggccagcgtgagtcaatgagc
gtgatccttcgagatttgcctacgagcactttcactgttggtcaaacagagcctcgtgtg
cgggtcttcgcgccaaacacccagggtgaaaagaactttgtagggccttttgtttcatat
caaattgctagagctctcgctcgttctcaaggtcgagaaggacacggtttacgatttgac
gagatccaagatcgcgtactgcctaaccttgagttaccgtcgaatgcgttacggccccgc
ctcaaacaagtcgctctgtacgacaagaatactcagatctggacgacgaaacaaataggg
tttgaagagtaccccggagttgacgccctcggcaggactattgcacccgaaggtgttgca
gcttttgagagtgcttgcgcagccagtcgccgactgtcagaccttggaatccaccaactt
ctagctggctcacatactgttctaagcgtgggcgtcattatggtctatatttccggacag
ctgaatgcagccaaagacttgtcaagaaaaatgaagaagctagcggaattgcgtcgctcg
aacaagagcatctcggctgtccaagtcgctttttatgaacaggcggccgcgatcattgaa
tctcattttaagatcttgcggcaaaaacatgaaattgcacagtttatatatgagcagctt
caacttgctccatggcatttgaccggtgagtttatcgatgttcataaaaaaggcgacggg
actggcatgatgaagctaactggtctcggcgacccaagcggtcaaggagaaggttttagc
tttatccgtgaagcggactcgaaaccaagcaagtccgtcgggaatgcagctctgagtgca
gaggtcaaaaagattactgggacagaagatgatcttcgaaaacttacgatgaagcaaatg
gcgagcttgcttcgctcatatggtatgacacaggaaaagattgatacactaaagaggtgg
gatcgagtgcacgtcatccgggatctttccacgaaagccgcgagcgatggaataggtgac
ggccttgaacgctttgcccgcggtgaaaaaatgaaactttcggagcagaagcagatgtat
cgggatcgtgtccgagtcatatggaggcgacagattgctgcattatcgatggatgacaag
gtcgctggaagcacagaaggagcggctatcgctgacggcgagaacgaagtttctggaatg
gcacagcaatcacaatccaataagccggacagcaccagtaagctaggctccgattcagat
tcatcagatgacgatgacgatcttgcagcggcgttggaagacgaaatgctggatcgatcg
gaagcgaatcagctcgttgcggagcatactggcggaggagaagctgacggcggtctggga
cagctgcgggcggctgcacaggaccacgagatgaataaggatgcccgcgagcttgcagca
ttaaagcggcagcgtgaggaggaaagggcagtccgcgaaggtttgcagtcgaacaagccg
aaggtagaatccttcgatacacaaatgcgttcaaacagaaaggtcataagaaagaaggta
gtaaaaacacatcccgacggccaccagacaacaaccttcaaattcgtcctcagacccgac
gaagtcggaaagatcatggcccggcttcagcaagacaacagcgaagatcaccgtcgaaaa
aaagagtttcagtacgaagcaaactcagacgaaaagcctccaggtcaagctttgttcgaa
gacgaagacgattttgagtattcttcccgcgggcgctttgccgacaaacgcggggggaat
cgtaagcggcgagccggaggtcgagcaactccccggggtacgctccagtttggaaaactg
aaaagcaaaatatccaaagaggaacggatgcggaagagaaaacgggaagaggaagaatta
gaagtttatactgcgtcagcgaagcacaaaggaactaacaaccgcaaggagcgcggttct
attcgaaaccgccgaccacatgttattttctccgaaaagttggaagcaattcggtcagcc
gtagaagcccgtccaggagctttaccgtttgtgaaacctgttaatcgacgtcttctaccc
aagtactacgaagttatcagcgatcccatcgacctgcagacaattcgagataagatcaag
cggtacgaatacagatctgccgacaaccttgttcgcgattttgacctcatgaaaagcaac
gccgtcaaattcaatggtcaaaccagccccatcgctcaggaagcgatcgcaattcacgag
tttgtttcgaatcaaattgaatcacaccggtccgaacttagcgctctcgagacagcggta
caggatcagatgaatggaaagccgaaaaagaaagtcaagaaaggcctaatgaaatctagt
ggatctggaaacactgcaagaataggaggcatatcagtcaaccttggagattttcaggga
atgcaattcgaagggaacgactcagatagtggggatgaagtttcgtttacagggcttttg
gatttttag
DBGET
integrated database retrieval system