Phaeodactylum tricornutum: PHATRDRAFT_43068
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Entry
PHATRDRAFT_43068 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_43068
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
PHATRDRAFT_43068
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
7196857
NCBI-ProteinID:
XP_002176879
JGI:
43068
UniProt:
B7FQI5
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All DBs
Position
1:1951702..1952912
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AA seq
349 aa
AA seq
DB search
MTGHRSASAPEQEHTHSLSVPISLGRPSLRLRLEAYYALISPDQISNNASWKERFNQIWR
KFGGSVEGERNLATKLSKKYGTAIRLQTVDLTRTTAADTGTSKSAWKRKEAYYDPKQSQQ
KSGVLDFGSQRFDPNATLAAPLSHVERDNVFVVSCPLLDRVELCKGLLPCSDPLYQRSKK
RERSGISVQVKNDESTKKVKPPSCFAEIAQDLQEGPFALMYNTFVHKQRVRVVLRYVNGI
RGIVTGYLVAFDKHFNLILRDVEEVYSKRAERGFEQSNAEMELRRRRTNLYRATDHLDWC
SRRRCMRQIMVRGDNVVIVYRAKDERSALHENSSLFQGDQHVSANDAPQ
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacgggccatcggtcagcatctgctccagaacaagaacacacacattcactttcagtc
ccaatctcgctcggtagaccttctttacgcctcagacttgaagcatattatgcattgatt
tcgcccgaccaaatatctaacaacgcttcttggaaagaacgctttaaccaaatttggaga
aaattcggaggatctgtggaaggcgaacggaatcttgctactaagttgtccaaaaagtat
ggcaccgctatccgattacaaaccgtagacttgacacgaacaactgccgcggatacgggg
acgtcgaagtcggcgtggaaaaggaaggaagcctattacgatccaaagcaatcgcaacaa
aagagtggagttttggactttggctcgcagagatttgatcccaatgcaaccctagcagcg
cctttatcacatgttgagcgcgataatgtgtttgtcgtgtcttgtcctttgcttgaccgt
gtcgaactttgtaaagggctccttccttgctcagatcctctatatcaacgatcaaaaaag
agagaacgatcgggcatctctgtgcaagtaaaaaatgatgaatcgacgaagaaggttaaa
cctccctcctgtttcgcagagatagcccaggatctccaagaaggtccatttgcactgatg
tataacacctttgtccacaagcagcgcgttcgcgttgttcttcggtacgtgaacggtata
cgaggcatagttacgggctatttggtggcgtttgacaagcatttcaacctgatccttcga
gatgtcgaagaagtctattcgaagcgagctgaacgaggatttgagcagtccaatgctgaa
atggagttgcgtcgtcgacgaacaaatctttaccgagcaacggatcatctcgattggtgt
agtaggcgtcgctgtatgcgtcaaattatggttcggggggataacgtcgtcattgtttac
cgtgcaaaagatgagcgctctgccttgcacgaaaattcaagccttttccaaggtgaccaa
cacgtcagtgcgaatgatgcgcctcagtaa
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