Phaeodactylum tricornutum: PHATRDRAFT_43202
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Entry
PHATRDRAFT_43202 CDS
T01075
Symbol
SLY1
Name
(RefSeq) hypothetical protein
KO
K19998
sec1 family domain-containing protein 1
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_43202 (SLY1)
Membrane trafficking [BR:
pti04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
PHATRDRAFT_43202 (SLY1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
PHATRDRAFT_43202 (SLY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Herpes_glycop
Motif
Other DBs
NCBI-GeneID:
7196570
NCBI-ProteinID:
XP_002176953
JGI:
43202
UniProt:
B7FQZ3
LinkDB
All DBs
Position
1:2300835..2302953
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AA seq
648 aa
AA seq
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MKDSSLKSAQLAAVHRMLAFNEVDGTAYENEYALPPAGSSHNQWKILIYDAACQAIISPI
LSVQQLRRRGVTLHLLLNSEREPIPDVPVIYFCRPTKQNLAIIAQDCAKGLYGRAHLNFV
TKLDRSLMEEFAKLVVQTGSLESIASVHDQYLDYVCMEKRLFSLHKVNSYVTYNSSGTTE
EMMEQAMTDIAYGLFSVVATLGQIPVIRCPRGGAPEMVARQLNRMIAEHPTLLRNKSSLT
RPLLVILDRNADLITPVQHTSTYQALIDDLLRHKANRVEFEVVQDPDAKRPKTILKRFDL
DPDEDAFYSAHKFQPFPEAIESNGTELQEVTTREQAIRSKAGGSDARNDPMASGATDLAN
AVDSLPALLDRKKQLEVHTSILQAVMNEVATRDVPQFYELESSLATGAYRNDLAKAKKEV
LALVSDETKGNIDDKIRLVMVYTLTTAAKTADLEEVKVTLQQVGDILGAEDKTASTRLAS
GIKALQYLKQLRSMHMIPSATDMLQELQTPSSASESSSTMLSSLMAKATTQATGLLAKAT
DRVASMLGKIHKHHATVVVENLCEMAQGSEDETYLYLDPKVKGDVDIHKLRGMNRAAIRN
VICFVIGGGSYGEYQNLQMLANDRLQIGYGSTELLDAGSFLAQLGQLG
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactcctctctaaaatccgcgcagttggcggcggtacaccggatgctcgccttt
aacgaagtggacgggacggcgtacgaaaatgagtacgcgctgccgcccgctggaagcagc
cacaatcagtggaagattctaatttacgatgcagcttgccaagcaatcatttctccgatt
ctttcggttcagcagctacgacgacggggggtgaccttgcacttgttgttgaatagtgag
cgtgagcccatccccgatgtaccggtcatttacttttgtcgaccgaccaagcaaaatttg
gcaatcattgcgcaggactgtgccaagggtctctacgggcgcgcgcatttaaatttcgta
acgaagcttgatcgatcactgatggaggaatttgccaagcttgttgtacagacaggatcg
ttagagtcgattgcttccgtgcatgaccagtatctggactatgtttgtatggaaaaacga
ctatttagcttgcacaaagtcaattcgtatgtcacttacaatagttccggaacaactgag
gaaatgatggaacaggcaatgacggatattgcgtacggcttgttttcggtagtagctacg
ctgggacagattccagtgattcgttgtccccgggggggtgctccggaaatggtggcccgt
caattgaatcgaatgatagctgagcatccaacactgctcaggaataaatcttctctgacg
agaccacttcttgttattttggatcggaatgctgatttgatcactccggttcagcatacc
agtacgtaccaggcgttaatcgatgatcttcttcgtcataaggcgaaccgcgtggaattt
gaagttgttcaagatccggatgccaaacgtccgaaaacaattctcaagaggtttgatttg
gatccagacgaggacgcattttattccgcacataagttccagccctttccagaagccatc
gaaagcaacggcacggagcttcaggaagtcaccacgagagaacaagctatacgctctaaa
gcgggaggaagtgatgctcgcaacgaccccatggcttcaggtgcaaccgatttagcgaat
gctgtggattcattacctgctctcttagatcgtaaaaaacagctagaagtacacacgagt
atcctacaagcagtcatgaatgaagtagccacacgagacgttcctcagttctacgaactc
gagtcgtctttggcaactggggcgtacaggaacgacttggctaaagcgaaaaaggaggtt
ttggccctcgtgagtgatgaaaccaagggaaatattgacgacaagatccgcttagtgatg
gtgtacactttaacaacggctgctaaaactgccgacttggaagaagtgaaagtgactttg
caacaagttggcgatattttgggagcggaggacaaaacggcgtcaactcgtctcgcctcg
ggaatcaaagctttacagtatctcaagcagctccggtctatgcatatgattccttctgct
actgatatgttgcaagagttgcaaacgccatcgtctgccagtgaatcgtccagcaccatg
ctgagcagcctcatggccaaagctacaacgcaagctactggtttattggcgaaggctacg
gatcgtgtggcctccatgttgggtaaaatccacaagcaccacgccacagtggtagtcgaa
aatttgtgcgaaatggcacagggtagcgaggatgaaacttatctatatttggaccctaag
gtcaagggagacgttgatatacacaagctacgtggcatgaatcgagcagcaattcgcaac
gtaatttgttttgtcataggcggcggctcgtatggagagtaccagaatttgcaaatgctg
gccaatgatcgtctacagattgggtacggcagcacggagcttttggacgccggatccttt
ttggcgcaattgggacaattaggatag
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