Phaeodactylum tricornutum: PHATRDRAFT_43244
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Entry
PHATRDRAFT_43244 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
PHATRDRAFT_43244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_43244
Membrane trafficking [BR:
pti04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
PHATRDRAFT_43244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
DUF3490
Motif
Other DBs
NCBI-GeneID:
7196963
NCBI-ProteinID:
XP_002176978
JGI:
43244
UniProt:
B7FR42
LinkDB
All DBs
Position
1:2430186..2430907
Genome browser
AA seq
165 aa
AA seq
DB search
MQGLAEVAGDPHRVQESQQKLERDVAPLAKEVQRQLHDTGREELFYQAPDIESSPHDMDR
LISSSDDLLRESQSILAETEYIGTNTIMQMGQQREQLQNANLNLEAVQRVTAQAKRLMVG
MSRKLLKTKLGLYFTIGVLSVANLWVLVKIYQKHHGTTGDGHDAQ
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggctggctgaagttgcaggcgatccgcaccgtgttcaggaatcgcagcaaaag
cttgaacgtgacgtggctccgttggccaaggaagtgcaacggcaactgcacgatacggga
cgggaagaattgttctatcaggctccggatattgagagctccccgcacgatatggaccgc
ctgatttcctcatcagacgatttgctgcgggaatcgcaatcgattctggcggaaacggag
tacattggaacgaacacgataatgcagatgggccaacagcgggagcagttgcagaacgcc
aatctgaatctggaagccgtgcagcgagttaccgctcaagcgaaacgactcatggttggg
atgagtcggaaactgctgaaaaccaaactcggcttgtactttacgataggcgtcttgagt
gtggcgaatctctgggtactggtcaagatttatcaaaaacatcacggtacgacaggcgat
ggccacgatgcgcagtag
DBGET
integrated database retrieval system
