KEGG   Phaeodactylum tricornutum: PHATRDRAFT_43401
Entry
PHATRDRAFT_43401  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K17890  autophagy-related protein 16-1
Organism
pti  Phaeodactylum tricornutum
Pathway
pti04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pti00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    PHATRDRAFT_43401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pti04131]
    PHATRDRAFT_43401
   03029 Mitochondrial biogenesis [BR:pti03029]
    PHATRDRAFT_43401
Membrane trafficking [BR:pti04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    PHATRDRAFT_43401
 Others
  Specific organelles associated proteins
   Auto phagosome
    PHATRDRAFT_43401
Mitochondrial biogenesis [BR:pti03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    PHATRDRAFT_43401
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40 Beta-prop_EML_2 EIF3I Beta-prop_EML WDR55 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_IFT122_1st ATG16 Beta-prop_IFT140_1st Beta-prop_DCAF4 NBCH_WD40 CCDC113_CCDC96_CC Beta-prop_SPT8 Beta-prop_SCAP CofB_beta-rpt Fez1 WD40_like DUF4763 HALZ Beta-prop_HPS5
Other DBs
NCBI-GeneID: 7197135
NCBI-ProteinID: XP_002177918
JGI: 43401
UniProt: B7FS47
LinkDB
Position
2:complement(351284..354146)
AA seq 564 aa
MNSVYELVIERNNRETAPFLSVHEANATLLIQVDALLTKYELSEREVSSLRQQLQDAAIT
SPGTKVTSAAAKAARKYEVQLRDKLEKLQDEYNAKLQSEANDQAAALKTAKDLSDMKDLN
TAQEMTIANLREENKGAERAIEHLTNELSEAKSRTDLAEKQYDGLKKTIRSLQIENDHLK
KESRIIEQRVVTEKGKTVDEVNILTEMVNSLKREVDMLRAYNKGSWFSKKVSKEKADNED
KQIVAKGQDSGRKWGTLGTVLPSAPKQTIDAHTMDGTCVKYDASGTNLVATSSSDSTVKI
WDTNTGTVRVTFRGTVGHSMMCCDINGSTVVGGSSDKTCRVWNLRTQRMIHHLVGHAHKV
TCVRLFANEHAVVTGSADRSLKVWDISHKTYRQTTTLRHSSTSNCVDVGTDSQTAVSGHL
DGGLRFWDLRSGERTEDISGLHEGAITSCQFSPTDSSLVLTNGADSCLKITDLRTGLPTH
TLRDGAFTTAHSWSHAVFSPDGRYVTAGSSSQGAVLVWSATDGSLVKTLRSHVAGVCAID
WCRGGSSGQQVASLDRQGKLILWA
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgaacagtgtctacgagttagtgattgaacgcaacaatcgcgagacagctccattcttg
tcggttcacgaagcaaacgcaacacttttaattcaggtagatgctctcctgaccaagtat
gagctctcggaacgagaagtttctagtttacgacagcaactgcaagatgcagcgatcact
tcaccaggaaccaaagtcacttcggcggcagctaaggccgctcgaaagtatgaagtccaa
ctacgcgacaagcttgaaaagttgcaggacgaatacaacgccaagctccagtcagaagcc
aacgatcaggctgccgcactgaaaaccgccaaggacttgagcgatatgaaggatttgaac
acagcgcaggaaatgacaatcgctaatttgcgagaagaaaataaaggtgctgaaagagcc
attgaacacttgactaacgaattgtccgaggccaaatcacgaaccgacttggcagaaaag
cagtatgatggactgaaaaagaccattcgcagtctccaaatagaaaacgaccatctgaag
aaggaaagccgaataattgaacaacgggtagtgacggaaaaggggaaaacagttgatgag
gtgaatattttgactgaaatggtgaattcactcaaacgggaagttgatatgcttcgtgcc
tacaataaaggttcttggtttagcaagaaagtctccaaggaaaaagctgataacgaagac
aaacaaattgtagcaaaaggacaggatagcggacggaaatggggcactttaggaacggtc
ttgccaagcgctcccaaacaaaccatcgacgcgcatactatggacggaacttgcgtgaag
tacgatgcatccgggaccaatttggtggcaacatcaagcagcgattcaaccgtgaaaata
tgggataccaacacgggtactgtacgggtaacattccggggaacagtcggacattccatg
atgtgttgcgacattaacggtagcactgtggtgggaggaagcagtgacaaaacttgtagg
gtttggaatttgaggactcaacgaatgattcatcatctcgttggccacgcccacaaagtt
acttgtgttcgattatttgccaatgagcacgccgtggttactggttctgccgatcgttct
ctcaaagtgtgggatatttcacacaaaacctaccgacaaacgaccacgttacgccacagc
tctacatcaaattgtgttgatgtcggaaccgattcccagacggctgtttcggggcatttg
gacggaggactacgattctgggatttgcgctccggagaacgcacggaagatatatccggt
ctccacgagggcgccatcacgtcttgccagttctctcccacggattccagtttggtattg
acaaacggagctgactcgtgcttgaagattaccgatctgcgtacaggcctacccacacat
acgctacgcgatggtgccttcactacggcccacagctggtctcacgccgtattttctccg
gacggacgctacgtgacggcgggctcgagcagtcaaggagcagttctggtctggagcgca
accgacggtagtttggtcaagacactacgttcacacgttgctggcgtttgcgctattgat
tggtgtcgcggtggatccagtggccagcaagtggcatcgttggatcggcaaggaaaacta
attttgtgggcgtaa

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