Phaeodactylum tricornutum: PHATRDRAFT_43418
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Entry
PHATRDRAFT_43418 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_43418
Spliceosome [BR:
pti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PHATRDRAFT_43418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CWC25
Cir_N
Motif
Other DBs
NCBI-GeneID:
7197144
NCBI-ProteinID:
XP_002177610
JGI:
43418
UniProt:
B7FS63
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Position
2:408733..410481
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AA seq
503 aa
AA seq
DB search
MVQGLAFLSKKSWHVKNLANQEKVWVAEQQQQAEAAKTQELAKQIQHEREREELEALTGK
KTTLDRGIDWMYQGQNAQSEIAEQDAIKKSEEYLLGKEYVPEGAIKGDLDDGQAMEGVNA
VLAAATVADTAGQSSTAYSEQTVAERNEAFRVRHEDPMFAVSTLAYQKTQQHERNKELYE
KVVGGVAVDEKRRSKKEKKRKRDREESPGRRSSRKHHRRDRKAHADNEHYDRRRRNDSKE
KDHHRRHDRRDGREHSQSHEPRHPRIHRSQRPSPKHHERRDHGGDYSHHRCQYDRSSSVD
SRNRSLSRERRGHGRNYRTPEYDYSKSQLNHQEVRSDRLNNDKARDDCEPCPTQYATVST
QTRAVLQKQKGFGLQNAPGRSKSSIMVHPQQLGPNQELLRRKRQEQQEEHRRVKELKSNR
RLLTSEEKTKALRDMETAAHRQEATRTSLSKHREKEDPPRLRNAAFLEKLSQQANGMHGE
GVNLADRVSRNRNTNQKLHDKFL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaggcttggcatttctcagcaaaaagtcttggcatgtgaagaatttggcgaat
caggaaaaagtgtgggttgccgagcagcagcaacaggcggaggcggccaagacgcaagaa
ctggccaagcaaattcagcacgaacgcgaacgggaagagctggaagcgcttactggtaag
aaaacaaccctcgatcgtggaatcgactggatgtaccaggggcaaaacgcacagtccgaa
attgcagaacaagacgccatcaaaaagtcggaagagtacttgctgggaaaagagtacgtt
ccggaaggagcaatcaagggcgacctggacgatggccaagccatggagggagtcaatgca
gtcctagcagcagcaacggtagccgacacagccggacaatcctcgacagcctactcagag
caaacggttgcggaacgcaacgaagcctttcgggtccgacacgaggatcccatgtttgcc
gtctcgacactcgcgtatcagaaaacgcaacagcacgagcgcaataaggaactctacgaa
aaggtggttggcggagttgctgtggacgagaaacgtcgttccaagaaagaaaagaagcgg
aaacgagaccgggaagaaagtccgggacggaggtcttcacggaagcatcaccgccgtgat
cggaaagcccacgcagacaacgagcactacgatcgtcgccgaagaaatgacagtaaggaa
aaggaccaccaccgtagacacgatcgtcgagacggccgtgagcatagccaaagccacgaa
cctcggcacccaagaattcaccgcagccagaggccaagtccaaagcaccatgaacgtcgg
gaccacggcggtgactactcacaccaccgttgccaatatgatcgcagtagtagcgtagat
tcccgtaatcgaagtttatcgagggaacggcgagggcatggaagaaactatcgaaccccg
gaatatgactactcgaagagccaactgaatcaccaggaagtgagaagtgatcgcctcaac
aacgacaaggctcgcgacgattgcgagccttgtccaacgcaatatgctaccgttagcacg
caaacgagagcagttcttcagaagcagaaaggatttggcttacaaaatgcacctggaaga
tcaaagtctagtatcatggtccacccccagcagttgggccccaaccaagagctgcttcga
cggaagcggcaagaacagcaagaagagcaccgtcgtgttaaggagctgaagtccaatcgt
cggcttctgacaagtgaagagaagaccaaggcgttaagggacatggaaacggctgctcat
cgacaagaagccactcggacgagtctatcgaagcacagggaaaaggaggacccaccccgg
cttcgaaatgcagcgtttctggagaagttgtcgcagcaagcaaatggaatgcacggggaa
ggtgtcaacttggccgaccgcgtttcacggaatcgcaacacaaaccagaaactgcacgac
aagtttctgtag
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