Phaeodactylum tricornutum: PHATRDRAFT_43504
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Entry
PHATRDRAFT_43504 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
PHATRDRAFT_43504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_43504
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
PHATRDRAFT_43504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EF3_N
HEAT
Vac14_Fab1_bd
TetR_C_31
Ipi1_N
Motif
Other DBs
NCBI-GeneID:
7197196
NCBI-ProteinID:
XP_002177978
JGI:
43504
UniProt:
B7FSG1
LinkDB
All DBs
Position
2:complement(655250..658319)
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AA seq
977 aa
AA seq
DB search
MAPLTKGKSGNAKNADFKRIKAKVGKKAPKPANVTDTAFRAASLQTSSQTSFTNGGAPAA
NLSDDVSLYSARGRSLQSLASQLSHPAAAVRASAAKGLYDLVSGAAATATGATSSSLLQA
HLSALIPAVGKCVVDEDSEVRTVGTNILRETVNKLNEKATMALRPFIKLLIAFVASALNS
LDRDSRRDGAILVELLSSSVPTLVAPYAVELLPALIRSLDDRDTRLPKQPGINGSSDTGT
KKRKRRLPSVVSNKSTANLNGRHLLLQSLVTLLQSAATLTGSSKSETQQQSATGEYLSEP
DLIFGTGGRSRNAVILRGRPTRRLAQLSPIQKLTDLPSLEAFRLSLARNDGPIKVGLNTS
LPPKTVQQLYHKLRDCFVETTQRGYFDAKQGYVMTVTDLSTFLLVAKALRLTWDVFGNEW
SQLQAESDVADMRKSFAQAVSLILEIFPISRADEATQVVADDVNGELCVTLVLMGPTSAN
QGKEKTGWADKVVAHVLTSMDEMHVQCHQASSMSPTSARSVFAVLNGLVLTGLCNVKSQN
RLISMFSSTFFAPESKDSARMCTSICRQATDVANRIFERINYDIDKASEPMQKLAVDVLK
TIPAYLVAWGAIYIPESSSAIALLHHLVRRLGDEDKSMLDLGKLRNDLDQLMMVSESMQK
QKFTTWSTVLECYPPTLQRLFVSLIIMLGKPSDITLKLLGRISARCQAKGDPDKLAIYVA
QSMFSIRKTVSMSSFLTFLIDGTGVFLFEESAFHSKPKTEGDNRYIRLFELDNGVRLAAT
NLVACGSSAKTLPMLEALLSTLIRSCDVTKTSTQRELFRIRAGFSILALFALDLRRQGSS
IFDILPRAFKVQAMAGIGRLLAHAPSLDSESNENIDRALQAWIRPVVTLLASEDGLLVDS
FTVLVSSLHNWPDTHRTSAVQTLLLVIRAPTLAPVFRRSDIAAMVAQAKVLEQASAESPL
ASIAGQVVAELELHISG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcttaccaaaggaaaaagcggtaacgcaaagaatgccgacttcaaacgtatt
aaggccaaagtgggcaagaaagccccaaagccagccaatgtcacggacacggcgttccgc
gctgcgtcgttgcaaactagctcccagacgtccttcaccaatggcggcgctccagcagca
aatctttccgatgatgtctcactctattcagcccgtggtcgatctttgcaaagtttggcg
tctcagttgtcccatccggctgccgcagtacgcgcatccgctgcgaaagggctgtatgat
ttagtttccggagcagcagcgacggctaccggtgcgactagcagtagtctcctgcaagcg
cacttgtcggctctcattccagccgttggtaaatgcgttgtcgacgaagacagcgaggtt
cgaactgttggaacgaacatcctccgtgaaacggtaaacaaactgaacgaaaaagctacg
atggcactgaggccattcatcaaacttttgattgcattcgtggcgtcggcactgaatagt
ttggatcgtgattctcgtcgcgacggtgccatccttgtcgaactgctgagttcgtcggta
cccacattggtagcaccctacgcggtggaactgctaccagccttgatccgatcgctggac
gatcgggacacccgtttgccgaaacaacccggcatcaacggaagcagtgacaccggcacc
aaaaagcgcaagcgtaggctgccgagcgtcgtatcgaataaatcgaccgctaatcttaat
gggcgtcacttgttgctgcagtcccttgtcaccttgctccaatcggcagcaaccctcaca
ggtagtagtaaatccgaaacgcaacaacagagtgcgacaggagagtacttgtcggagccc
gatttaatttttggcactggagggcgatcccgaaatgctgtgattctccgaggtcgacca
acacgacggcttgctcaactgtctcccattcagaagcttaccgacttaccatccttggaa
gcatttcggctatctttagcgagaaacgacggcccgatcaaagtgggtttgaatacgtct
ttacctccgaaaacggttcagcaattgtatcacaaattgcgagattgctttgttgaaaca
actcagcgaggctattttgacgctaaacaaggctacgtgatgactgttaccgatttgtct
accttcttactcgttgcaaaggctttacgattgacctgggacgtttttggcaacgaatgg
tctcagcttcaagcagaatcggatgtcgctgacatgcgcaaaagttttgcacaggctgtg
tctttaatcctggagatttttccgatttcgcgtgcagacgaagcaacacaagttgtggcc
gacgatgtgaatggtgagctgtgtgtgactctggttttgatggggcccaccagcgccaac
caggggaaggagaaaactggctgggcagataaagttgttgcgcacgtcttgacttccatg
gacgaaatgcatgtgcagtgtcaccaagccagctccatgagcccaacttcggcacgctct
gtctttgctgtattgaatgggttggttttgactgggctgtgcaatgtgaaatctcagaac
agattaattagtatgttcagctccacattctttgcacccgaaagcaaggactcagctcga
atgtgcacaagcatttgtcgtcaggcgacggatgtggcgaacaggatctttgaaaggata
aactatgatatcgacaaggccagtgagccaatgcaaaagcttgctgttgatgtcctgaag
actataccggcctatttggtagcttggggcgccatctacataccggaaagttcgagcgca
atagcattgctccatcaccttgtgcgtagactgggcgacgaagataagagcatgctggat
ttgggcaagctgcgcaatgatttggatcagttgatgatggtctccgaaagcatgcagaag
caaaagttcacgacgtggtctacggtccttgaatgctatccgcctacgctacaacgactg
tttgtaagtctcattattatgctcggaaagcccagcgatattaccctgaagcttttgggg
cgaatctctgcccgatgccaagccaaaggcgaccctgacaagttggccatttatgttgct
caatcaatgtttagcatccgtaagaccgtctctatgtcatcgtttctgacgtttttgatt
gacggcaccggtgtctttcttttcgaagagtcggcgtttcacagtaaacccaagaccgag
ggagataaccggtatatacgcctgtttgaattggataatggtgttcgtttggcagccacg
aaccttgtcgcgtgtggatcctcggccaagacacttccgatgctggaagccctcttatca
acattaattcgaagctgtgacgtaacaaagacgtcgacacaacgtgagttgttccggatt
cgagctggtttttcgattctggcactctttgccttggatctccgtcgtcagggatccagc
atttttgacattctgccccgggcgttcaaggtacaagccatggccggcatcggacggctt
ctcgcacacgcaccgagtctcgactcggaatcaaacgaaaatatcgacagggcccttcaa
gcgtggatccgtccggtggtgaccctgttggcttcggaggacggacttttggtagattcg
tttacggtcctggtgtcgtccttgcataactggcccgacacccaccggaccagcgcggtc
cagaccctgttgctagtcatacgggccccgacgttggcacccgtatttcgacgtagtgat
attgcggccatggtggcgcaggctaaagtcttggagcaggcctcggcggagagtccgctc
gcaagcatcgcgggtcaagtcgtggcggaactcgaattgcacattagcgggtga
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