Phaeodactylum tricornutum: PHATRDRAFT_43576
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Entry
PHATRDRAFT_43576 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHATRDRAFT_43576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_43576
Spliceosome [BR:
pti03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PHATRDRAFT_43576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
7197455
NCBI-ProteinID:
XP_002178021
JGI:
43576
UniProt:
B7FSP8
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Position
2:complement(854421..856188)
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AA seq
483 aa
AA seq
DB search
MEGTSTLADSLLDDLDDLSDVEDVADDAKNILQGETETSQTHKEFTGPRRKRFLDDPNLL
KHVNEVRYNEKNNMEKPQSKDQDAEEYRLIVQSNKQLANLANELSLTHIDLCTAYHPKFP
ELEELLPGTGQYKDAVRVIRNEMDMTKVNEGLNAFLNSNQIITISVSGSTTSGRMLLEEE
LVVVDKLIEYMDQICELQSELNLFVESRMEGLAPNVCALIGPTTAAKLLALAGGLAELSG
IPACNLQVLGQVKQNAASRAGFSSATTRPHEGTLAECDLVRRCPRHLQKRALKMVAAKLA
LAARCDYVNVNSGRERTPTSGRQFRSDIESKISQWHEPDRAQVLKALPKPDLTIKKRRGG
KRMRRLKERYEETAMMKQANTRAFSAKAGEYGDDAMGLSLGLLDKSDVTASGSLRKKTEK
RKLRVANTKASRKRAEQMKATTNTNGLARMELVNPDANRERLREANNKWFSNNAGFQSAL
PKK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaacaagtacactagcagactcgctgttggacgatctcgacgacctttccgac
gtcgaagacgtcgccgacgatgcgaaaaacatattgcaaggcgaaacagaaacgtcgcaa
acccacaaggaatttactggaccaagaagaaagcgatttctggacgatccgaatttgctg
aaacatgtcaatgaggtgagatacaatgaaaagaacaatatggagaagccacagagcaaa
gaccaggatgcagaagagtaccgactcatcgtgcagtccaacaagcaactcgcgaactta
gcaaacgagctatctctgacccacatcgacctctgcaccgcctatcatccgaaatttccg
gaattggaagagctgttgccgggtactggtcagtacaaggatgctgttcgtgtgattcgt
aacgaaatggacatgacaaaagtcaacgaaggtctgaatgcctttctcaacagtaatcag
atcattacgattagtgtatctgggagtacaacatcaggtcgtatgcttttggaagaagaa
ctagttgtcgtcgacaaactgatcgagtacatggaccaaatttgtgagctgcaatctgaa
ttgaatctgtttgtagaatcccgcatggaaggcctcgcaccaaatgtgtgcgcattgatc
ggccctacaacggccgccaaacttttagcactggcaggaggtctagccgagctgtcagga
atcccagcctgcaatcttcaggtcctaggacaggtcaaacagaacgcggccagtcgtgcc
ggattttcgtcagccaccacaaggccccacgaaggaaccttggccgaatgcgacctagtc
cgtagatgccctcggcaccttcaaaaaagggctctcaagatggttgcggccaagctcgcg
cttgcagcgcgttgcgattacgtcaacgttaattctggacgggagagaaccccgacatcg
ggacgacagtttcgctccgatattgaatccaagatttctcagtggcacgagccagacagg
gctcaagttctaaaagcattaccaaaacccgatcttacgataaagaagcgtcgtggcggc
aaacgaatgcggcgccttaaggaacgttacgaagaaacagcgatgatgaaacaggcaaat
acccgggcgttttcagcgaaagccggagagtacggcgatgacgcgatggggttgagtttg
gggcttttggataaatctgacgtcacagctagtgggagcttgcgcaaaaagacagaaaaa
cgcaaattgagagtagcgaataccaaggcatcgcgaaagcgcgccgagcagatgaaggca
acaacgaatacaaacggattggctaggatggaattggtgaatcctgatgctaatcgagaa
cgattgcgagaggcaaataacaaatggttcagcaataacgcagggtttcaatcggcgctg
ccgaaaaagtag
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