Phaeodactylum tricornutum: PHATRDRAFT_43627
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Entry
PHATRDRAFT_43627 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_43627
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
PHATRDRAFT_43627
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Motif
Other DBs
NCBI-GeneID:
7197496
NCBI-ProteinID:
XP_002178055
JGI:
43627
UniProt:
B7FSX3
LinkDB
All DBs
Position
2:complement(1039094..1043306)
Genome browser
AA seq
1396 aa
AA seq
DB search
MKNLSIQGERRRCIRHGDVFGETSKLVDICELLNESLDSLRILLDNTGKLVCLSDFEEVV
WTCELSNVCMGSRDISWFSLTYVDPILVCMSHDGAIVKISPETGEAEIVGEFENGIEAGC
WSPDCEILLLVTSNRLDDDPYTEKSVLLSMNARWEVLAETNIETHASAKLDLANEVSVCW
KPDGTLCAVSSVDASDSARSLRIYKGETLALHAIGRSEDGTGKLVRNLQPTKVAWAGPGC
SQFLASVQRKGKNTQVVVFFEPNGLRHREFTLREHDASVVLALNWNADCKLLALSLRAEK
CDKVQIWHRSNYHWYLKQEFVYNAERIASVQFHTENPSTLYVLFDSSHSWREYKIRWDSS
TVLSEPSSCNVFVIDGCMLKVTPLVRAIIPPPLSAAQITFPFSVKEVAFIRHRIAPIIGV
VQLSNGSLHLLAREGGEESSFISNFCAPKPHRELDTSHLGFVPMELRNMVIVQVGADELR
VVAILCATESRPRETFVDIAVSMTTGHTALLNSIDLKERVLAVVQWCDSLEGALVELEGG
HFLEYEVMSSTLLLSQVEPLLEPCPWIAALKNNTSVGESLNCHQSRIVVGLSARHRLYCN
DLLLCDAASSFEVSMMHLYLCFVSSGSHCQMRFIALRDLWQFDPLMGSEENVLSVGFEPR
NVERGTGLVAILPTQPAAVLQMPRGNLETIYPRALVLRYSLLKISDGRYGEAFRMMRRQK
IDLNLIVDVNPWYFLDFGLAVFIKEVYNIHDLNLFISGLQASDCTQSRQLISKDLRQIFK
TTGEHLECFDFSSKVNQICAAMRKLLTQMETGMASPSKTRKTHEYLLPILSTYAKEDPPK
LEEALALIKKYAVEYQQDTHSCVSDKKPALFSEYAQSSIQYLAFLAEYDLLFSTALGMYD
YEIARAVARNSQMDPKVYLPLLKRYKDFPVFYGRYEVDLRLKRYERALRNLHRSGVCQEF
PTQDGFADTNATDNFRCCMKLIEEHSLHGVGLKLFEQDETKQAQIMLSLGDQMMTEKKVE
TALSLYLACSISDTERIKRAARVSQNWRVFFQIAMGEITGSDVEHRKFLLGHEVADELAT
KAEGSVAKNELLCEAARILLDYACDPVASVDMLIRAENWVEAKRIGELVERNDLCRKTVE
AACSYVYSTIEDLQNRAASFFDANKRYAEVIKIRREAVGSGDGEEGEIDDGEDDSSVFSS
RSNASFSSLPSTASTGSVGSTASLSSIISIKSTSSFNLVGTEETNRHKSKYNRAGRNKIK
KKKRGKSSKIRPGSVEELDGLVQSMKSACLDDGYSDAISKTVIFLIRTGEQATAKKLFSS
YVSMTDSCDQSRRCRWEAEKVEQVNKDRNQRSAGGTRIASTRLSVEDEVDTIKSSELSSS
VYEFFSYFDHESSYCV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctatcaatacagggagaacgccgtcgatgtattcgacacggggatgtcttt
ggtgagacgtcaaaacttgtcgacatctgcgagttgctcaacgaatctttagactccctt
cgtattttactggacaatacaggaaaacttgtttgcttgagcgattttgaagaagtagtc
tggacatgcgagttgagtaatgtttgcatggggtcaagagacatttcttggtttagtctc
acttacgtggaccccattcttgtctgcatgagccacgatggtgctattgtaaaaatttct
ccagaaacgggagaagcagagattgttggtgaatttgagaatgggatcgaggcagggtgc
tggagtcctgattgtgagattcttcttctagttacttcgaacagactagatgacgatccg
tacaccgaaaaatcggtacttttaagcatgaatgcacgatgggaggtcctcgccgagaca
aatattgagactcatgcttcagcaaagttggatctcgccaacgaagtttctgtctgctgg
aagcccgatggcacattgtgtgcggtgtcttctgtagacgcttccgattctgcccgatca
ctccgaatatacaaaggagagacgcttgcactacatgccatcggccgttcagaagacgga
actggcaaactggtgcggaatcttcagccaactaaagtagcttgggctggaccaggatgc
tctcaatttttagcatctgttcagcgcaaagggaagaacacgcaagttgtggtattcttt
gagccaaacggcttaaggcatcgtgaatttactcttcgcgagcacgatgcttctgtagta
ttggctttgaactggaatgctgactgcaagctattggcgttgagtctcagggcagagaag
tgcgataaagtacaaatttggcatagatccaactaccactggtacctcaaacaagaattt
gtttacaatgctgagcggattgcttcggtgcagtttcacacagaaaaccccagtacactc
tacgtccttttcgattctagtcatagctggagggagtacaagattcgatgggattcgagt
accgttttgagcgagcctagctcttgtaacgtatttgtgatagacggctgtatgctgaaa
gtcaccccacttgttagagctatcatccctcctcccttgtcggcggcacagattacattc
cctttttctgtgaaagaggttgctttcatacgacatcgtatagcaccgatcataggcgtt
gttcagctttcaaatggaagccttcatttgcttgcacgggaaggtggtgaggaaagctct
tttatatccaatttttgtgcaccaaagcctcatcgcgagcttgatacgtcgcatcttggt
tttgtcccgatggagctccgcaatatggtcatagtacaggtcggtgctgatgaacttcgg
gttgtggcaatcttatgtgctacagaatctcgaccacgtgagacctttgtggacatagcg
gtttctatgacaactggacacaccgctctgttgaattctatcgatttaaaggaaagagtt
cttgccgttgtacaatggtgcgattcattggagggcgcccttgttgaactagaaggcggt
cactttctagaatacgaagtcatgtcaagcaccttacttctctcgcaagtcgaacctctg
ttagagccctgcccatggattgctgcgttgaaaaataatacgagcgttggggaatcactt
aactgtcaccaatcaaggatcgttgtgggtctatctgcccgccatcgtctgtattgtaat
gatttattgctttgcgatgcagcttcgtcattcgaagtttcaatgatgcatctttacctc
tgtttcgtatcatcggggtctcactgccaaatgcgcttcattgctctcagagacctctgg
caattcgatccattaatgggatctgaggaaaacgttctctccgttggttttgaacccaga
aatgttgagcggggcacaggtttggttgcgatacttcctacgcaaccagctgctgtgctt
caaatgccacgaggaaatctagaaaccatatatccgcgagctctggtgctgcgttattcc
ctcttgaagatttctgatgggcgatatggtgaagcatttagaatgatgcgtcgtcagaag
atcgatctgaatttgattgtggatgtaaatccatggtatttcttggacttcggcctggca
gtcttcatcaaagaagtctacaatatccacgacctcaaccttttcatctcaggtttacaa
gcttccgattgtacgcagtctcgtcagcttatctcaaaagacttgcgacaaatcttcaaa
accactggagagcacttagaatgttttgatttctcatccaaagtgaatcaaatctgtgct
gcgatgcgcaaacttctaacgcaaatggaaacgggcatggcttctccttcaaagactcgt
aaaacacacgaatatctacttccgatcctctcaacatacgctaaagaggaccccccaaaa
cttgaagaggcattggctctaataaagaagtatgcggtcgagtatcagcaagatactcat
tcctgtgtatctgataaaaagccggctcttttctcggagtatgcacaaagctctattcaa
tatcttgcatttcttgcagaatacgatcttctgtttagtactgctttgggtatgtatgac
tacgaaatcgccagagcagttgccagaaactcgcagatggatccaaaagtgtatcttccc
ctcctaaaacggtacaaagattttccagtgttctatgggcggtacgaagtagacttgcga
ctaaaaaggtatgaaagagctcttcggaacttgcataggtcgggcgtttgccaggaattt
cctacccaagatggatttgctgatacaaatgcaacggacaacttcaggtgttgtatgaag
ttaattgaagagcacagtcttcatggcgtaggtcttaagctttttgaacaagatgaaact
aagcaggcgcaaatcatgctttcccttggagaccaaatgatgacggagaagaaagtggag
actgccttgtcattatatttggcatgctccatttctgatactgagcgcattaagagagct
gcgagggtctcacagaactggagggttttttttcagattgccatgggagaaataacagga
tctgacgtagaacatcgaaagttcctgcttgggcatgaagtcgctgacgaattagcgaca
aaagctgaaggtagtgttgcgaaaaacgagcttctttgtgaagctgcaagaattctgctt
gactacgcctgtgaccctgtcgcatcagtggatatgctcatccgggccgaaaactgggta
gaagctaaacgaattggcgaactcgtcgagcgaaacgacttatgtcggaaaacagttgag
gctgcatgttcttatgtctactcgaccatagaagatttgcaaaacagagcagcatctttt
tttgatgcaaacaagaggtatgccgaagtgatcaaaatccgaagagaagcggttggttcc
ggcgatggcgaagaaggggaaatcgatgatggcgaagatgatagctcggttttttcctct
agatccaacgcttcgttttcgtcgctcccaagcacggccagtacaggtagcgttggtagc
acggcgagcctttcatcaattatcagtatcaagtcgacaagctcatttaatcttgtaggt
accgaggaaaccaatcgtcataaaagcaagtacaatagggctggacgaaacaagattaaa
aagaagaagagaggtaaatcatcgaagataagaccaggaagtgtcgaagagttagatggc
cttgtccagtcgatgaaatctgcttgcttggatgacgggtatagtgatgctatatcaaaa
acagtgatatttctaatacgcactggagagcaagcaacagcgaagaagcttttcagctcc
tatgtatccatgacggacagctgtgaccagtcgcgtcgatgtagatgggaagcagaaaag
gttgagcaggtgaataaagaccgtaatcagcgctcggctgggggcaccagaatcgcaagt
actaggctttcagtcgaagatgaagttgacacaatcaagtcttcggaactctctagctct
gtgtatgagtttttctcgtatttcgatcatgaatcttcctattgtgtatga
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